Evidence map›Paper›PMID 29285300›Full record

ArticleOncotarget2017

Renal oncocytoma characterized by the defective complex I of the respiratory chain boosts the synthesis of the ROS scavenger glutathione.

Gerrit Kürschner, Qingzhou Zhang, Rosanna Clima, Yi Xiao, Jonas Felix Busch, Ergin Kilic, Klaus Jung, Nikolaus Berndt, Sascha Bulik, Hermann-Georg Holzhütter and 4 more

Open access · diamondAbstract read
In one paragraph

Article in Oncotarget, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
2.2field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 45 citations in OpenAlex.

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  13. Mitochondrial DNA variation and cancer.Nature reviews. Cancer · 2021
    Review
  14. Review
  15. Rapid and Culture Free Identification ofFrontiers in microbiology · 2020
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 6 institutions in 3 countries.

Gerrit Kürschner *Max Planck Institute for Molecular Genetics, Mass Spectrometry Facility, Berlin, Germany.
Qingzhou Zhang *University of Regina, Department of Biochemistry, Regina, Canada.
Rosanna ClimaUniversity of Bari, Department of Biosciences, Biotechnology and Biopharmaceutics, Bari, Italy.
Yi XiaoMax Planck Institute for Molecular Genetics, Mass Spectrometry Facility, Berlin, Germany.
Jonas Felix BuschUniversity Hospital Charité, Department of Urology, Berlin, Germany.
Ergin KilicUniversity Hospital Charité, Institute of Pathology, Berlin, Germany.
Klaus JungUniversity Hospital Charité, Department of Urology, Berlin, Germany.
Nikolaus BerndtCharité University Medicine Berlin, Institute of Biochemistry Computational Systems Biochemistry Group, Berlin, Germany.
Sascha BulikCharité University Medicine Berlin, Institute of Biochemistry Computational Systems Biochemistry Group, Berlin, Germany.
Hermann-Georg HolzhütterCharité University Medicine Berlin, Institute of Biochemistry Computational Systems Biochemistry Group, Berlin, Germany.
Giuseppe GasparreDepartment of Medical and Surgical Sciences-DIMEC, Medical Genetics Unit, University of Bologna, Bologna, Italy.
Marcella AttimonelliUniversity of Bari, Department of Biosciences, Biotechnology and Biopharmaceutics, Bari, Italy.
Mohan BabuUniversity of Regina, Department of Biochemistry, Regina, Canada.
David MeierhoferMax Planck Institute for Molecular Genetics, Mass Spectrometry Facility, Berlin, Germany.
Charité - Universitätsmedizin Berlin · DEMax Planck Institute for Molecular Genetics · DEUniversity of Bologna · ITUniversity of Regina · CATechnische Universität Berlin · DEUniversity of Bari Aldo Moro · IT

Funding

Supplement to: PHYSICAL AND FUNCTIONAL SYSTEMS ANALYSIS OF MAMMALIAN MITOCHONDRIAR01GM106019 · NIGMS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI BABU, MOHAN, NUNNARI, JODI M. · 2013 to 2016
$954k
NIGMS NIH HHS R01 GM106019
6 · The paper itself

Abstract

Renal oncocytomas are rare benign tumors of the kidney and characterized by a deficient complex I (CI) enzyme activity of the oxidative phosphorylation (OXPHOS) system caused by mitochondrial DNA (mtDNA) mutations. Yet, little is known about the underlying molecular mechanisms and alterations of metabolic pathways in this tumor. We compared renal oncocytomas with adjacent matched normal kidney tissues on a global scale by multi-omics approaches, including whole exome sequencing (WES), proteomics, metabolomics, and metabolic pathway simulation. The abundance of proteins localized to mitochondria increased more than 2-fold, the only exception was a strong decrease in the abundance for CI subunits that revealed several pathogenic heteroplasmic mtDNA mutations by WES. We also observed renal oncocytomas to dysregulate main metabolic pathways, shunting away from gluconeogenesis and lipid metabolism. Nevertheless, the abundance of energy carrier molecules such as NAD

Indexed as

complex I deficiencyglutathione metabolismmtDNA mutationrenal oncocytoma

Identifiers

PMID29285300
PMCPMC5739687
OpenAlexW2768265155

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.