Evidence map›Paper›PMID 29284740›Full record

ArticleCancer research2018

Familial and Somatic

Hongzhuang Peng, Jeremy Prokop, Jayashree Karar, Kyewon Park, Li Cao, J William Harbour, Anne M Bowcock, S Bruce Malkowicz, Mitchell Cheung, Joseph R Testa and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Cancer research, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.6field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
  2. Phenotype-Specific Recalibration of MAVE Data Enables Repurposing ofmedRxiv : the preprint server for health sciences · 2026
    Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. ASXL1/2 mutations and myeloid malignancies.Journal of hematology & oncology · 2022
    Review
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Review
  15. Article
  16. Review
  17. Deubiquitinating Enzymes and Bone Remodeling.Stem cells international · 2018
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 1 country.

Hongzhuang PengWistar Institute, Philadelphia, Pennsylvania.
Jeremy ProkopHudsonAlpha Genome Sequencing Center, Huntsville, Alabama.
Jayashree KararWistar Institute, Philadelphia, Pennsylvania.
Kyewon ParkWistar Institute, Philadelphia, Pennsylvania.
Li CaoWashington University in St Louis, St. Louis, Missouri.
J William HarbourUniversity of Miami School of Medicine, Miami, Florida.
Anne M BowcockIcahn School of Medicine at Mount Sinai, New York, New York.
S Bruce MalkowiczUniversity of Pennsylvania and Veterans Affairs Medical Center Philadelphia, Philadelphia, Pennsylvania.
Mitchell CheungFox Chase Cancer Center, Philadelphia, Pennsylvania.
Joseph R TestaFox Chase Cancer Center, Philadelphia, Pennsylvania. joseph.testa@fccc.edu rauscher@wistar.org.
Frank J RauscherWistar Institute, Philadelphia, Pennsylvania. joseph.testa@fccc.edu rauscher@wistar.org.
Icahn School of Medicine at Mount Sinai · US

Funding

WORD PROCESSING CENTER--COREP30CA006927 · NCI · RESEARCH INST OF FOX CHASE CAN CTR · PI Margaret von Mehren · 1985 to 2026
$138.8M
Tumor Microenvironment and MetastasisP30CA010815 · NCI · WISTAR INSTITUTE · PI Luis J Montaner · 1985 to 2026
$75.9M
THE GENETICS OF OCULAR MELANOMAR01CA161870 · NCI · WASHINGTON UNIVERSITY · PI BOWCOCK, ANNE MARY · 2011 to 2024
$5.5M
MOLECULAR PREDICTIVE TESTING IN OCULAR MELANOMAR01CA125970 · NCI · WASHINGTON UNIVERSITY · PI CORREA, ZELIA MARIA, HARBOUR, JAMES WILLIAM · 2006 to 2021
$4.9M
Pathogenesis of Malignant Mesothelioma by the Human Polycomb Complex BAP1-ASXLR01CA175691 · NCI · RESEARCH INST OF FOX CHASE CAN CTR · PI RAUSCHER III, FRANK JOSEPH, TESTA, JOSEPH R. · 2014 to 2018
$2.7M
Functional Analysis of the BAP1 Metastasis Suppressor Gene in Uveal MelanomaR01CA163761 · NCI · WISTAR INSTITUTE · PI RAUSCHER III, FRANK JOSEPH · 2012 to 2016
$1.8M
Using a Sequence-to-Structure-to-Function Approach to Functionally Characterize Protein Coding Missense Mutations in the Human and Rat GenomesK01ES025435 · NIEHS · MICHIGAN STATE UNIVERSITY · PI PROKOP, JEREMY WILLIAM · 2014 to 2018
$489k
NCI NIH HHS P30 CA006927NCI NIH HHS P30 CA010815NCI NIH HHS R01 CA125970NCI NIH HHS R01 CA161870NCI NIH HHS R01 CA163761NCI NIH HHS R01 CA175691NIEHS NIH HHS K01 ES025435
6 · The paper itself

Abstract

Deleterious mutations of the ubiquitin carboxy-terminal hydrolase BAP1 found in cancers are predicted to encode inactive truncated proteins, suggesting that loss of enzyme function is a primary tumorigenic mechanism. However, many tumors exhibit missense mutations or in-frame deletions or insertions, often outside the functionally critical UCH domain in this tumor suppressor protein. Thus, precisely how these mutations inactivate BAP1 is unknown. Here, we show how these mutations affect BAP1 interactions with the Polycomb group-like protein, ASXL2, using combinations of computational modeling technology, molecular biology, and

Indexed as

MutationAllosteric RegulationAmino Acid SequenceBiomarkers, TumorHEK293 CellsHumansModels, MolecularNeoplasmsProtein ConformationProtein Interaction Domains and MotifsRepressor ProteinsSequence HomologyTumor Suppressor ProteinsUbiquitinUbiquitin ThiolesteraseASXL1 protein, humanASXL2 protein, humanBAP1 protein, humanBiomarkers, TumorRepressor ProteinsTumor Suppressor ProteinsUbiquitinUbiquitin Thiolesterase

Identifiers

PMID29284740
PMCPMC6167014
OpenAlexW2780657269

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.