Evidence map›Paper›PMID 29284660›Full record

ArticleGenetics2018

The ModERN Resource: Genome-Wide Binding Profiles for Hundreds of

Michelle M Kudron, Alec Victorsen, Louis Gevirtzman, LaDeana W Hillier, William W Fisher, Dionne Vafeados, Matt Kirkey, Ann S Hammonds, Jeffery Gersch, Haneen Ammouri and 22 more

Open access · bronzeAbstract read
In one paragraph

Article in Genetics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 157 papers.

0numbers the graph read from it
0cells of the map it votes in
157citing papers in PubMed
5.2field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

157 citing papers in PubMed, 251 citations in OpenAlex.

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97 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

32 authors at 4 institutions in 1 country.

Michelle M KudronDepartment of Genetics, Yale University, New Haven, Connecticut 06520.
Alec VictorsenInstitute for Genomics and Systems Biology, Department of Human Genetics, University of Chicago, Illinois 60637.
Louis GevirtzmanDepartment of Genome Sciences, University of Washington School of Medicine, Seattle, Washington 98195.
LaDeana W HillierDepartment of Genome Sciences, University of Washington School of Medicine, Seattle, Washington 98195.
William W FisherDivision of Biological Systems and Engineering, Lawrence Berkeley National Laboratory, Berkeley, California 94720.
Dionne VafeadosDepartment of Genome Sciences, University of Washington School of Medicine, Seattle, Washington 98195.
Matt KirkeyInstitute for Genomics and Systems Biology, Department of Human Genetics, University of Chicago, Illinois 60637.
Ann S HammondsDivision of Biological Systems and Engineering, Lawrence Berkeley National Laboratory, Berkeley, California 94720.
Jeffery GerschInstitute for Genomics and Systems Biology, Department of Human Genetics, University of Chicago, Illinois 60637.
Haneen AmmouriInstitute for Genomics and Systems Biology, Department of Human Genetics, University of Chicago, Illinois 60637.
Martha L WallInstitute for Genomics and Systems Biology, Department of Human Genetics, University of Chicago, Illinois 60637.
Jennifer MoranInstitute for Genomics and Systems Biology, Department of Human Genetics, University of Chicago, Illinois 60637.
David SteffenInstitute for Genomics and Systems Biology, Department of Human Genetics, University of Chicago, Illinois 60637.
Matt SzynkarekInstitute for Genomics and Systems Biology, Department of Human Genetics, University of Chicago, Illinois 60637.
Samantha Seabrook-SturgisInstitute for Genomics and Systems Biology, Department of Human Genetics, University of Chicago, Illinois 60637.
Nader JameelInstitute for Genomics and Systems Biology, Department of Human Genetics, University of Chicago, Illinois 60637.
Madhura KadabaInstitute for Genomics and Systems Biology, Department of Human Genetics, University of Chicago, Illinois 60637.
Jaeda PattonDepartment of Genome Sciences, University of Washington School of Medicine, Seattle, Washington 98195.
Robert TerrellDepartment of Genome Sciences, University of Washington School of Medicine, Seattle, Washington 98195.
Mitch CorsonDepartment of Genome Sciences, University of Washington School of Medicine, Seattle, Washington 98195.
Timothy J DurhamDepartment of Genome Sciences, University of Washington School of Medicine, Seattle, Washington 98195.
Soo ParkDivision of Biological Systems and Engineering, Lawrence Berkeley National Laboratory, Berkeley, California 94720.
Swapna SamantaDepartment of Genetics, Yale University, New Haven, Connecticut 06520.
Mei HanDepartment of Genetics, Yale University, New Haven, Connecticut 06520.
Jinrui XuProgram in Computational Biology and Bioinformatics, Yale University, New Haven, Connecticut 06520.
Koon-Kiu YanProgram in Computational Biology and Bioinformatics, Yale University, New Haven, Connecticut 06520.
Susan E CelnikerDivision of Biological Systems and Engineering, Lawrence Berkeley National Laboratory, Berkeley, California 94720.
Kevin P WhiteInstitute for Genomics and Systems Biology, Department of Human Genetics, University of Chicago, Illinois 60637.
Lijia MaInstitute for Genomics and Systems Biology, Department of Human Genetics, University of Chicago, Illinois 60637.
Mark GersteinProgram in Computational Biology and Bioinformatics, Yale University, New Haven, Connecticut 06520.
Valerie ReinkeDepartment of Genetics, Yale University, New Haven, Connecticut 06520.
Robert H WaterstonDepartment of Genome Sciences, University of Washington School of Medicine, Seattle, Washington 98195 watersto@uw.edu.
University of Chicago · USUniversity of Washington · USYale University · USLawrence Berkeley National Laboratory · US

Funding

VIRAL ONCOLOGY CORE FACILITYP30CA014599 · NCI · UNIVERSITY OF CHICAGO · PI MARK W. LINGEN · 1985 to 2026
$122.1M
Resource ProjectU41HG007355 · NHGRI · UNIVERSITY OF WASHINGTON · PI WATERSTON, ROBERT H · 2013 to 2021
$20.8M
PREDOCTORAL TRAINING PROGRAM IN GENETICST32GM007499 · NIGMS · YALE UNIVERSITY · PI CARLSON, JOHN R, REINKE, VALERIE J · 1985 to 2022
$13.9M
Resource Component: Acquisition, maintenance and distribution of Drosophila stocksP40OD018537 · OD · TRUSTEES OF INDIANA UNIVERSITY · PI Annette L. Parks · 2014 to 2026
$13.5M
Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Aric L Daul, Ann E. Rougvie · 2012 to 2026
$7.5M
Patterned Gene Expression in Drosophila DevelopmentR01GM076655 · NIGMS · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI CELNIKER, SUSAN E · 2006 to 2020
$6.8M
NCI NIH HHS P30 CA014599NHGRI NIH HHS U41 HG007355NIGMS NIH HHS R01 GM076655NIGMS NIH HHS T32 GM007499NIH HHS P40 OD010440NIH HHS P40 OD018537
6 · The paper itself

Abstract

To develop a catalog of regulatory sites in two major model organisms,

Indexed as

Databases, GeneticGenome-Wide Association StudyAnimalsBinding SitesCaenorhabditis elegansChromatin ImmunoprecipitationDrosophilaModels, BiologicalNucleotide MotifsProtein BindingTranscription FactorsTranscription Factorsbinding sitesCaenorhabditis elegansDrosophilaregulationtranscription factors

Identifiers

PMID29284660
PMCPMC5844342
OpenAlexW2777064170

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.