Evidence map›Paper›PMID 29284564›Full record

ArticleTicks and tick-borne diseases2018

The folA gene from the Rickettsia endosymbiont of Ixodes pacificus encodes a functional dihydrofolate reductase enzyme.

James L Bodnar, Sergio Fitch, Allison Rosati, Jianmin Zhong

Open access · greenAbstract read
In one paragraph

Article in Ticks and tick-borne diseases, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Ecology ofPathogens (Basel, Switzerland) · 2022
    Review
  7. Discovery and Surveillance of Tick-Borne Pathogens.Journal of medical entomology · 2021
    Article
  8. Article
  9. Review
  10. Article
  11. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

James L BodnarDepartment of Biological Sciences, Humboldt State University, 1 Harpst Street, Arcata, CA, 95521, USA. Electronic address: jlb264@humboldt.edu.
Sergio FitchDepartment of Biological Sciences, Humboldt State University, 1 Harpst Street, Arcata, CA, 95521, USA. Electronic address: sf935@humboldt.edu.
Allison RosatiDepartment of Biological Sciences, Humboldt State University, 1 Harpst Street, Arcata, CA, 95521, USA. Electronic address: anr47@humboldt.edu.
Jianmin ZhongDepartment of Biological Sciences, Humboldt State University, 1 Harpst Street, Arcata, CA, 95521, USA. Electronic address: jz15@humboldt.edu.
Humboldt State University · US

Funding

Symbiotic Rickettsia Species as a Model System for the Study of Folate BiosynthesR15AI099902 · NIAID · HUMBOLDT STATE UNIVERSITY · PI ZHONG, JIANMIN · 2012 to 2012
$354k
NIAID NIH HHS R15 AI099902
6 · The paper itself

Abstract

Although nonpathogenic bacterial endosymbionts have been shown to contribute to their arthropod host's fitness by supplying them with essential vitamins and amino acids, little is known about the nutritional basis for the symbiotic relationship of endosymbionts in ticks. Our lab has previously reported that Rickettsia species phylotype G021 in Ixodes pacificus carries all five genes for de novo folate synthesis, and that these genes are monophyletic with homologs from other Rickettsia species. In this study, the rickettsial folate synthesis folA gene, coding for dihydrofolate reductase, was PCR amplified, cloned into an expression vector, and overexpressed in E. coli. Bioinformatic analysis identified that the FolA protein of phylotype G021 has the conserved DHFR domain, NADP binding sites, and substrate binding sites of bacterial dihydrofolate reductase. SDS-PAGE results showed that recombinant rickettsial FolA protein was overexpressed in BL21(DE3) E. coli in its soluble form. Affinity chromatography was used to purify the protein, and in vitro enzyme assays were performed to assess the biochemical activity of dihydrofolate reductase. The specific activity of recombinant FolA from phylotype G021 was determined to be 16.1 U/mg. This study has revealed that Rickettsia species phylotype G021 of I. pacificus is capable of producing a functional enzyme of the folate biosynthesis pathway, addressing the nutritional interactions behind the symbiosis between Rickettsia species phylotype G021 and its host.

Indexed as

AnimalsBacterial ProteinsBiosynthetic PathwaysComputational BiologyEscherichia coliIxodesPolymerase Chain ReactionRecombinant ProteinsRickettsiaSymbiosisTetrahydrofolate DehydrogenaseBacterial ProteinsRecombinant ProteinsTetrahydrofolate DehydrogenaseDihydrofolate reductaseIn vitro enzymatic assayIxodes pacificusRecombinant proteinRickettsia species phylotype G021

Identifiers

PMID29284564
PMCPMC5857425
OpenAlexW2778431742

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.