Evidence map›Paper›PMID 29284014›Full record

ArticlePloS one2017

Isolation and characterization of a N4-like lytic bacteriophage infecting Vibrio splendidus, a pathogen of fish and bivalves.

Pantelis Katharios, Panos G Kalatzis, Constantina Kokkari, Elena Sarropoulou, Mathias Middelboe

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed, 1 pooled it
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 1 synthesis or guideline pooled it, 50 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. A novel phage vB_VhaM_HVS-1 inhibits host cell associatedFrontiers in veterinary science · 2026
    Article
  4. The Biology of Nucleus-Forming Jumbo Phages.Annual review of genetics · 2025
    Review
  5. Article
  6. Know Your Enemy:Antibiotics (Basel, Switzerland) · 2025
    Article
  7. Unveiling Hidden Allies: In Silico Discovery of Prophages inAntibiotics (Basel, Switzerland) · 2024
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Isolation and characterization of a novelFrontiers in microbiology · 2023
    Article
  14. Article
  15. Article
  16. Review
  17. Vibrio Phage Artemius, a Novel Phage InfectingPathogens (Basel, Switzerland) · 2022
    Article
  18. Article
  19. Article
  20. Phage Therapy as a Focused Management Strategy in Aquaculture.International journal of molecular sciences · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Pantelis KathariosInstitute of Marine Biology, Biotechnology and Aquaculture, Hellenic Centre for Marine Research, Crete, Greece.ORCID 0000-0001-9905-5068
Panos G KalatzisInstitute of Marine Biology, Biotechnology and Aquaculture, Hellenic Centre for Marine Research, Crete, Greece.
Constantina KokkariInstitute of Marine Biology, Biotechnology and Aquaculture, Hellenic Centre for Marine Research, Crete, Greece.
Elena SarropoulouInstitute of Marine Biology, Biotechnology and Aquaculture, Hellenic Centre for Marine Research, Crete, Greece.
Mathias MiddelboeMarine Biological Section, University of Copenhagen, Helsingør, Denmark.
Hellenic Centre for Marine Research · GRUniversity of Copenhagen · DK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A novel virulent bacteriophage, vB_VspP_pVa5, infecting a strain of Vibrio splendidus was isolated from a sea-cage aquaculture farm in Greece, and characterized using microbiological methods and genomic analysis. Bacteriophage vB_VspP_pVa5 is a N4-like podovirus with an icosahedral head measuring 85 nm in length and a short non-contractile tail. The phage had a narrow host range infecting only the bacterial host, a latent period of 30 min and a burst size of 24 virions per infected bacterium. Its genome size was 78,145 bp and genomic analysis identified 107 densely-packed genes, 40 of which could be annotated. In addition to the very large virion encapsulated DNA-dependent RNA polymerase which is the signature of the N4-like genus, an interesting feature of the novel phage is the presence of a self-splicing group I intron in the thymidylate synthase gene. A tRNAStop interrupted by a ~2.5kb open reading frame-containing area was also identified. The absence of genes related to lysogeny along with the high efficacy observed during in vitro cell lysis trials, indicate that the vB_VspP_pVa5 is a potential candidate component in a bacteriophage cocktail suitable for the biological control of V. splendidus in aquaculture.

Indexed as

AnimalsAquacultureBacteriophagesBivalviaFishesMicroscopy, Electron, TransmissionPhylogenyVibrio

Identifiers

PMID29284014
PMCPMC5746245
OpenAlexW2780287976

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.