Evidence map›Paper›PMID 29283551›Full record

ArticleBiochemistry2018

Mechanism and Structure of γ-Resorcylate Decarboxylase.

Xiang Sheng, Yury Patskovsky, Anna Vladimirova, Jeffrey B Bonanno, Steven C Almo, Fahmi Himo, Frank M Raushel

Open access · greenAbstract read
In one paragraph

Article in Biochemistry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
3.0field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 38 citations in OpenAlex.

  1. Article
  2. Bioinformatic Discovery of a Cambialistic Monooxygenase.Journal of the American Chemical Society · 2024
    Article
  3. Article
  4. Article
  5. Enzymatic Conversion of COChemical reviews · 2023
    Review
  6. The Quantum Chemical Cluster Approach in Biocatalysis.Accounts of chemical research · 2023
    Review
  7. Article
  8. Article
  9. Review
  10. Review
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Xiang ShengDepartment of Organic Chemistry, Arrhenius Laboratory , Stockholm University , SE-106 91 Stockholm , Sweden.ORCID 0000-0002-6542-6649
Yury PatskovskyAlbert Einstein College of Medicine , 1300 Morris Park Avenue , Bronx , New York 10461 , United States.
Anna VladimirovaDepartment of Chemistry , Texas A&M University , College Station , Texas 77842 , United States.
Jeffrey B BonannoAlbert Einstein College of Medicine , 1300 Morris Park Avenue , Bronx , New York 10461 , United States.
Steven C AlmoAlbert Einstein College of Medicine , 1300 Morris Park Avenue , Bronx , New York 10461 , United States.
Fahmi HimoDepartment of Organic Chemistry, Arrhenius Laboratory , Stockholm University , SE-106 91 Stockholm , Sweden.ORCID 0000-0002-1012-5611
Frank M RaushelDepartment of Chemistry , Texas A&M University , College Station , Texas 77842 , United States.ORCID 0000-0002-5918-3089
Albert Einstein College of Medicine · USStockholm University · SETexas A&M University · US

Funding

Core H: MicrobiologyU54GM093342 · NIGMS · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI CRONAN, JOHN E. · 2010 to 2015
$34.6M
Translational Research CoreP30DK020541 · NIDDK · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI STREAMSON C CHUA · 2015 to 2026
$27.7M
NIDDK NIH HHS P30 DK020541NIGMS NIH HHS U54 GM093342
6 · The paper itself

Abstract

γ-Resorcylate decarboxylase (γ-RSD) has evolved to catalyze the reversible decarboxylation of 2,6-dihydroxybenzoate to resorcinol in a nonoxidative fashion. This enzyme is of significant interest because of its potential for the production of γ-resorcylate and other benzoic acid derivatives under environmentally sustainable conditions. Kinetic constants for the decarboxylation of 2,6-dihydroxybenzoate catalyzed by γ-RSD from Polaromonas sp. JS666 are reported, and the enzyme is shown to be active with 2,3-dihydroxybenzoate, 2,4,6-trihydroxybenzoate, and 2,6-dihydroxy-4-methylbenzoate. The three-dimensional structure of γ-RSD with the inhibitor 2-nitroresorcinol (2-NR) bound in the active site is reported. 2-NR is directly ligated to a Mn

Indexed as

Binding SitesCarboxy-LyasesCatalysisCrystallography, X-RayDecarboxylationHydroxybenzoatesKineticsProtein Structural ElementsResorcinolsSubstrate Specificity2,6-dihydroxybenzoate decarboxylaseCarboxy-LyasesHydroxybenzoatesresorcinolResorcinols

Identifiers

PMID29283551
PMCPMC5988983
OpenAlexW2778508518

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.