Evidence map›Paper›PMID 29283077›Full record

ArticleEpidemiology and infection2018

Species distribution, sequence types and antimicrobial resistance of Acinetobacter spp. from cystic fibrosis patients.

G A Rocha, D F Lima, E R Rodrigues, R S Leão, T W Folescu, M C Firmida, R W F Cohen, R M Albano, E A Marques

Open access · bronzeAbstract read
In one paragraph

Article in Epidemiology and infection, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed, 2 pooled it
0.5field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 2 syntheses or guidelines pooled it, 15 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Article
  4. Article
  5. Article
  6. Identification of theJournal of clinical medicine · 2023
    Article
  7. International journal of molecular sciences · 2021
    Article
  8. Review
  9. Article
  10. Frontiers in microbiology · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

G A RochaDepartamento de Microbiologia,Imunologia e Parasitologia,Universidade do Estado do Rio de Janeiro,Rio de Janeiro, RJ,Brazil.
D F LimaDepartamento de Microbiologia,Imunologia e Parasitologia,Universidade do Estado do Rio de Janeiro,Rio de Janeiro, RJ,Brazil.
E R RodriguesDepartamento de Microbiologia,Imunologia e Parasitologia,Universidade do Estado do Rio de Janeiro,Rio de Janeiro, RJ,Brazil.
R S LeãoDepartamento de Microbiologia,Imunologia e Parasitologia,Universidade do Estado do Rio de Janeiro,Rio de Janeiro, RJ,Brazil.
T W FolescuDepartamento de Pneumologia Pediátrica,Instituto Nacional da Saúde da Mulher, da Criança e do Adolescente Fernandes Figueira (IFF-FIOCRUZ),Rio de Janeiro, RJ,Brazil.
M C FirmidaHospital Universitário Pedro Ernesto, Universidade do Estado do Rio de Janeiro,Rio de Janeiro, RJ,Brazil.
R W F CohenDepartamento de Pneumologia Pediátrica,Instituto Nacional da Saúde da Mulher, da Criança e do Adolescente Fernandes Figueira (IFF-FIOCRUZ),Rio de Janeiro, RJ,Brazil.
R M AlbanoDepartamento de Bioquímica,Universidade do Estado do Rio de Janeiro,Rio de Janeiro, RJ,Brazil.
E A MarquesDepartamento de Microbiologia,Imunologia e Parasitologia,Universidade do Estado do Rio de Janeiro,Rio de Janeiro, RJ,Brazil.
Universidade do Estado do Rio de Janeiro · BRFundação Oswaldo Cruz · BRHospital Universitário Pedro Ernesto · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Acinetobacter spp. are important healthcare pathogens, being closely linked to antibiotic resistance and outbreaks worldwide. Although such species are rarely observed in patients with cystic fibrosis (CF), we describe the characteristics of 53 strains of Acinetobacter spp. isolated from the sputum of 39 Brazilian patients with CF. The species distribution was A. baumannii (n = 29), A. pittii (n = 13), A. nosocomialis (n = 8), A. seifertii (n = 1), A. soli (n = 1) and A. variabilis (n = 1) determined by partial rpoB gene sequencing. Sixteen strains (10 A. baumannii, 3 A. pittii and 3 A. nosocomialis) were multidrug-resistant (MDR) by disk diffusion test (30%) and eight MDR carbapenem-resistant A. baumannii strains harboured the bla OXA-23-like oxacillinase gene. Thirty-three sequence types (STs) were identified by multilocus sequence typing of which eight were novel (A. baumannii: 843, 844, 845, 847, 848; A. pitti: 643; A. nosocomialis: 862 and A. seifertii: 846); six STs (2 A. baumannii, 3 A. pittii and 1 A. nosocomialis) were found in more than one patient. Four strains of A. baumannii were assigned to two common clonal complexes (CCs), namely, CC1 (ST1, ST20 and ST160), and CC79 (ST79). This study underlines the extensive species diversity of Acinetobacter spp. strains in CF lung infections which may present difficulties for therapy due to significant antimicrobial resistance.

Indexed as

Drug Resistance, BacterialAcinetobacter InfectionsAdultAlgorithmsAnti-Bacterial AgentsBrazilChildCystic FibrosisHumansMicrobial Sensitivity TestsPolymerase Chain ReactionRetrospective StudiesSputumAnti-Bacterial AgentsAcinetobacter spp.cystic fibrosismultidrug resistancemultilocus sequence typing

Identifiers

PMID29283077
PMCPMC9134553
OpenAlexW2780134739

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.