Evidence map›Paper›PMID 29282323›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2018

Affinity purification mass spectrometry analysis of PD-1 uncovers SAP as a new checkpoint inhibitor.

Michael Peled, Anna S Tocheva, Sabina Sandigursky, Shruti Nayak, Elliot A Philips, Kim E Nichols, Marianne Strazza, Inbar Azoulay-Alfaguter, Manor Askenazi, Benjamin G Neel and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 56 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
56citing papers in PubMed, 1 pooled it
4.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

56 citing papers in PubMed, 1 synthesis or guideline pooled it, 89 citations in OpenAlex.

  1. Pooled it
  2. Understanding the Therapeutic Potential of PD-1 Agonism in Inflammatory and Autoimmune Disorders.BioDrugs : clinical immunotherapeutics, biopharmaceuticals and gene therapy · 2026
    Review
  3. Article
  4. Article
  5. Review
  6. Review
  7. Article
  8. Proteomic Investigation of Immune Checkpoints and Some of Their Inhibitors.International journal of molecular sciences · 2024
    Review
  9. Article
  10. Article
  11. Article
  12. Review
  13. Review
  14. Review
  15. Review
  16. Article
  17. Immune Checkpoint Receptors Signaling in T Cells.International journal of molecular sciences · 2022
    Review
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 1 country.

Michael PeledDepartment of Medicine, New York University School of Medicine, New York, NY 10016.
Anna S TochevaDepartment of Medicine, New York University School of Medicine, New York, NY 10016.
Sabina SandigurskyDepartment of Medicine, New York University School of Medicine, New York, NY 10016.
Shruti NayakProteomics Laboratory, Division of Advanced Research Technologies, New York University School of Medicine, New York, NY 10016.
Elliot A PhilipsDepartment of Biochemistry and Molecular Pharmacology, New York University School of Medicine, New York, NY 10016.
Kim E NicholsDepartment of Oncology, St. Jude Children's Research Hospital, Memphis, TN 38105.
Marianne StrazzaDepartment of Medicine, New York University School of Medicine, New York, NY 10016.
Inbar Azoulay-AlfaguterDepartment of Medicine, New York University School of Medicine, New York, NY 10016.
Manor AskenaziBiomedical Hosting LLC, Arlington, MA 02474.
Benjamin G NeelPerlmutter Cancer Center, New York University School of Medicine, New York, NY 10016.
Adam J PelzekDepartment of Medicine, New York University School of Medicine, New York, NY 10016.
Beatrix UeberheideProteomics Laboratory, Division of Advanced Research Technologies, New York University School of Medicine, New York, NY 10016.
Adam MorDepartment of Medicine, New York University School of Medicine, New York, NY 10016; Adam.Mor@NYUMC.org.
New York University · USSt. Jude Children's Research Hospital · US

Funding

Vaccine FacilityP30CA016087 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI ADRIANA HEGUY · 1985 to 2026
$83.1M
Training Program in Immunology and Inflammation.T32AI100853 · NIAID · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI Susan Ruth Schwab · 2012 to 2026
$4.5M
SIGNAL TRANSDUCTION BY NON-TRANSMEMBRANE PTPSR01CA049152 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI NEEL, BENJAMIN G. · 1989 to 2020
$4.4M
Novel mechanisms regulating PD-1 signaling and functionR01AI125640 · NIAID · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI Adam Mor · 2016 to 2026
$4.3M
Translational Basic and Clinical Research Training in RheumatologyT32AR069515 · NIAMS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI Jill P Buyon, Jose U. Scher · 2017 to 2026
$2.9M
NCI NIH HHS P30 CA016087NCI NIH HHS R01 CA049152NIAID NIH HHS R01 AI125640NIAID NIH HHS T32 AI100853NIAMS NIH HHS T32 AR069515
6 · The paper itself

Abstract

Programmed cell death-1 (PD-1) is an essential inhibitory receptor in T cells. Antibodies targeting PD-1 elicit durable clinical responses in patients with multiple tumor indications. Nevertheless, a significant proportion of patients do not respond to anti-PD-1 treatment, and a better understanding of the signaling pathways downstream of PD-1 could provide biomarkers for those whose tumors respond and new therapeutic approaches for those whose tumors do not. We used affinity purification mass spectrometry to uncover multiple proteins associated with PD-1. Among these proteins, signaling lymphocytic activation molecule-associated protein (SAP) was functionally and mechanistically analyzed for its contribution to PD-1 inhibitory responses. Silencing of SAP augmented and overexpression blocked PD-1 function. T cells from patients with X-linked lymphoproliferative disease (XLP), who lack functional SAP, were hyperresponsive to PD-1 signaling, confirming its inhibitory role downstream of PD-1. Strikingly, signaling downstream of PD-1 in purified T cell subsets did not correlate with PD-1 surface expression but was inversely correlated with intracellular SAP levels. Mechanistically, SAP opposed PD-1 function by acting as a molecular shield of key tyrosine residues that are targets for the tyrosine phosphatase SHP2, which mediates PD-1 inhibitory properties. Our results identify SAP as an inhibitor of PD-1 function and SHP2 as a potential therapeutic target in patients with XLP.

Indexed as

AnimalsBiomarkers, TumorCell Cycle CheckpointsCell ProliferationCytokinesGene Expression Regulation, EnzymologicGene SilencingHEK293 CellsHumansJurkat CellsMaleMass SpectrometryMiceMice, KnockoutProgrammed Cell Death 1 ReceptorProtein Tyrosine Phosphatase, Non-Receptor Type 11Biomarkers, TumorCytokinesPDCD1 protein, humanProgrammed Cell Death 1 ReceptorProtein Tyrosine Phosphatase, Non-Receptor Type 11PTPN11 protein, humanSignaling Lymphocytic Activation Molecule FamilyPD-1SAPSHP2T cellsXLP

Identifiers

PMID29282323
PMCPMC5776966
OpenAlexW2776794264

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.