Evidence map›Paper›PMID 29281742›Full record

ArticlePLoS pathogens2017

RNA elongation by respiratory syncytial virus polymerase is calibrated by conserved region V.

Molly R Braun, Laure R Deflubé, Sarah L Noton, Michael E Mawhorter, Chadene Z Tremaglio, Rachel Fearns

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
1.4field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 44 citations in OpenAlex.

  1. Article
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  6. Structural insights into the dynamic mechanism of bornavirus polymerase.Proceedings of the National Academy of Sciences of the United States of America · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Molly R BraunDepartment of Microbiology, Boston University School of Medicine, Boston, MA, United States of America.ORCID 0000-0002-7730-565X
Laure R DeflubéDepartment of Microbiology, Boston University School of Medicine, Boston, MA, United States of America.
Sarah L NotonDepartment of Microbiology, Boston University School of Medicine, Boston, MA, United States of America.
Michael E MawhorterDepartment of Microbiology, Boston University School of Medicine, Boston, MA, United States of America.ORCID 0000-0001-6439-676X
Chadene Z TremaglioDepartment of Microbiology, Boston University School of Medicine, Boston, MA, United States of America.
Rachel FearnsDepartment of Microbiology, Boston University School of Medicine, Boston, MA, United States of America.ORCID 0000-0003-0783-7498
Boston University · US

Funding

Initiation and regulation of RSV mRNA transcription and genome replicationR01AI113321 · NIAID · BOSTON UNIVERSITY MEDICAL CAMPUS · PI FEARNS, RACHEL · 2014 to 2017
$1.7M
NIAID NIH HHS R01 AI113321NIH HHS R01AI113321
6 · The paper itself

Abstract

The large polymerase subunit (L) of non-segmented negative strand RNA viruses transcribes viral mRNAs and replicates the viral genome. Studies with VSV have shown that conserved region V (CRV) of the L protein is part of the capping domain. However, CRV folds over and protrudes into the polymerization domain, suggesting that it might also have a role in RNA synthesis. In this study, the role of respiratory syncytial virus (RSV) CRV was evaluated using single amino acid substitutions and a small molecule inhibitor called BI-D. Effects were analyzed using cell-based minigenome and in vitro biochemical assays. Several amino acid substitutions inhibited production of capped, full-length mRNA and instead resulted in accumulation of short transcripts of approximately 40 nucleotides in length, confirming that RSV CRV has a role in capping. In addition, all six variants tested were either partially or completely defective in RNA replication. This was due to an inability of the polymerase to efficiently elongate the RNA within the promoter region. BI-D also inhibited transcription and replication. In this case, polymerase elongation activity within the promoter region was enhanced, such that the small RNA transcribed from the promoter was not released and instead was elongated past the first gene start signal. This was accompanied by a decrease in mRNA initiation at the first gene start signal and accumulation of aberrant RNAs of varying length. Thus, in addition to its function in mRNA capping, conserved region V modulates the elongation properties of the polymerase to enable productive transcription and replication to occur.

Indexed as

Amino Acid SequenceAmino Acid SubstitutionAntiviral AgentsCell LineConserved SequenceDrug DiscoveryGenes, ViralHumansModels, MolecularPromoter Regions, GeneticRespiratory Syncytial Virus, HumanRespiratory Syncytial Virus InfectionsRNA CapsRNA-Dependent RNA PolymeraseRNA, MessengerRNA, ViralAntiviral AgentsRNA CapsRNA-Dependent RNA PolymeraseRNA, MessengerRNA, ViralViral Proteins

Identifiers

PMID29281742
PMCPMC5760109
OpenAlexW2778218941

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.