Evidence map›Paper›PMID 29281709›Full record

ArticlePloS one2017

Beyond greenness: Detecting temporal changes in photosynthetic capacity with hyperspectral reflectance data.

Mallory L Barnes, David D Breshears, Darin J Law, Willem J D van Leeuwen, Russell K Monson, Alec C Fojtik, Greg A Barron-Gafford, David J P Moore

Abstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Mallory L BarnesSchool of Natural Resources and the Environment, University of Arizona, Tucson, Arizona, United States of America.ORCID 0000-0001-8528-6981
David D BreshearsSchool of Natural Resources and the Environment, University of Arizona, Tucson, Arizona, United States of America.
Darin J LawSchool of Natural Resources and the Environment, University of Arizona, Tucson, Arizona, United States of America.
Willem J D van LeeuwenSchool of Natural Resources and the Environment, University of Arizona, Tucson, Arizona, United States of America.
Russell K MonsonDepartment of Ecology and Evolutionary Biology, University of Arizona, Tucson, Arizona, United States of America.
Alec C FojtikDepartment of Geology, Wheaton College, Wheaton, Illinois, United States of America.
Greg A Barron-GaffordSchool of Geography and Development, University of Arizona, Tucson, Arizona, United States of America.
David J P MooreSchool of Natural Resources and the Environment, University of Arizona, Tucson, Arizona, United States of America.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Earth's future carbon balance and regional carbon exchange dynamics are inextricably linked to plant photosynthesis. Spectral vegetation indices are widely used as proxies for vegetation greenness and to estimate state variables such as vegetation cover and leaf area index. However, the capacity of green leaves to take up carbon can change throughout the season. We quantify photosynthetic capacity as the maximum rate of RuBP carboxylation (Vcmax) and regeneration (Jmax). Vcmax and Jmax vary within-season due to interactions between ontogenetic processes and meteorological variables. Remote sensing-based estimation of Vcmax and Jmax using leaf reflectance spectra is promising, but temporal variation in relationships between these key determinants of photosynthetic capacity, leaf reflectance spectra, and the models that link these variables has not been evaluated. To address this issue, we studied hybrid poplar (Populus spp.) during a 7-week mid-summer period to quantify seasonally-dynamic relationships between Vcmax, Jmax, and leaf spectra. We compared in situ estimates of Vcmax and Jmax from gas exchange measurements to estimates of Vcmax and Jmax derived from partial least squares regression (PLSR) and fresh-leaf reflectance spectroscopy. PLSR models were robust despite dynamic temporal variation in Vcmax and Jmax throughout the study period. Within-population variation in plant stress modestly reduced PLSR model predictive capacity. Hyperspectral vegetation indices were well-correlated to Vcmax and Jmax, including the widely-used Normalized Difference Vegetation Index. Our results show that hyperspectral estimation of plant physiological traits using PLSR may be robust to temporal variation. Additionally, hyperspectral vegetation indices may be sufficient to detect temporal changes in photosynthetic capacity in contexts similar to those studied here. Overall, our results highlight the potential for hyperspectral remote sensing to estimate determinants of photosynthetic capacity during periods with dynamic temporal variations related to seasonality and plant stress, thereby improving estimates of plant productivity and characterization of the associated carbon budget.

Indexed as

PhotosynthesisChlorophyllPlant LeavesRegression AnalysisSeasonsChlorophyll

Identifiers

PMID29281709
PMCPMC5744967

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.