Evidence map›Paper›PMID 29280944›Full record

ArticleInternational journal of molecular sciences2017

NGS Reveals Molecular Pathways Affected by Obesity and Weight Loss-Related Changes in miRNA Levels in Adipose Tissue.

Alina Kuryłowicz, Zofia Wicik, Magdalena Owczarz, Marta Izabela Jonas, Marta Kotlarek, Michał Świerniak, Wojciech Lisik, Maurycy Jonas, Bartłomiej Noszczyk, Monika Puzianowska-Kuźnicka

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed.

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  16. Article
  17. Prevention of Diabetes and Cardiovascular Disease in Obesity.International journal of molecular sciences · 2020
    Review
  18. Review
  19. Induction of Adipose Tissue Browning as a Strategy to Combat Obesity.International journal of molecular sciences · 2020
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Alina KuryłowiczDepartment of Human Epigenetics, Mossakowski Medical Research Centre, Polish Academy of Sciences (PAS), 5 Pawinskiego Street, 02106 Warsaw, Poland. akurylowicz@imdik.pan.pl.ORCID 0000-0001-8632-4927
Zofia WicikDepartment of Human Epigenetics, Mossakowski Medical Research Centre, Polish Academy of Sciences (PAS), 5 Pawinskiego Street, 02106 Warsaw, Poland. zwicik@imdik.pan.pl.
Magdalena OwczarzDepartment of Human Epigenetics, Mossakowski Medical Research Centre, Polish Academy of Sciences (PAS), 5 Pawinskiego Street, 02106 Warsaw, Poland. mowczarz@imdik.pan.pl.
Marta Izabela JonasDepartment of Human Epigenetics, Mossakowski Medical Research Centre, Polish Academy of Sciences (PAS), 5 Pawinskiego Street, 02106 Warsaw, Poland. martajonas@poczta.onet.pl.
Marta KotlarekGenomic Medicine, Medical University of Warsaw, 02097 Warsaw, Poland. marta.kotlarek@wum.edu.pl.
Michał ŚwierniakGenomic Medicine, Medical University of Warsaw, 02097 Warsaw, Poland. michal.swierniak@wum.edu.pl.
Wojciech LisikDepartment of General and Transplantation Surgery, Medical University of Warsaw, 00001 Warsaw, Poland. wojciech.lisik@wum.edu.pl.
Maurycy JonasDepartment of General and Transplantation Surgery, Medical University of Warsaw, 00001 Warsaw, Poland. morjon@poczta.onet.pl.
Bartłomiej NoszczykDepartment of Plastic Surgery, Medical Centre of Postgraduate Education, 00416 Warsaw, Poland. noszczyk@melilot.pl.
Monika Puzianowska-KuźnickaDepartment of Human Epigenetics, Mossakowski Medical Research Centre, Polish Academy of Sciences (PAS), 5 Pawinskiego Street, 02106 Warsaw, Poland. mpuzianowska@imdik.pan.pl.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Both obesity and weight loss may cause molecular changes in adipose tissue. This study aimed to characterize changes in adipose tissue miRNome in order to identify molecular pathways affected by obesity and weight changes. Next generation sequencing (NGS) was applied to identify microRNAs (miRNAs) differentially expressed in 47 samples of visceral (VAT) and subcutaneous (SAT) adipose tissues from normal-weight (N), obese (O) and obese after surgery-induced weight loss (PO) individuals. Subsequently miRNA expression was validated by real-time PCR in 197 adipose tissues and bioinformatics analysis performed to identify molecular pathways affected by obesity-related changes in miRNA expression. NGS identified 344 miRNAs expressed in adipose tissues with ≥5 reads per million. Using >2 and <-2 fold change as cut-offs we showed that the expression of 54 miRNAs differed significantly between VAT-O and SAT-O. Equally, between SAT-O and SAT-N, the expression of 20 miRNAs differed significantly, between SAT-PO and SAT-N the expression of 79 miRNAs differed significantly, and between SAT-PO and SAT-O, the expression of 61 miRNAs differed significantly. Ontological analyses disclosed several molecular pathways regulated by these miRNAs in adipose tissue. NGS-based miRNome analysis characterized changes of the miRNA profile of adipose tissue, which are associated with changes of weight possibly responsible for a differential regulation of molecular pathways in adipose tissue when the individual is obese and after the individual has lost weight.

Indexed as

TranscriptomeAdipose TissueFemaleGene Expression RegulationHigh-Throughput Nucleotide SequencingHumansMaleMicroRNAsObesitySignal TransductionWeight LossMicroRNAsadipose tissuemiRNomemolecular pathwaysnext generation sequencingobesity

Identifiers

PMID29280944
PMCPMC5796016

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.