Evidence map›Paper›PMID 29279960›Full record

ArticleMammalian genome : official journal of the International Mammalian Genome Society2018

Quantitative trait mapping in Diversity Outbred mice identifies two genomic regions associated with heart size.

John R Shorter, Wei Huang, Ju Youn Beak, Kunjie Hua, Daniel M Gatti, Fernando Pardo-Manuel de Villena, Daniel Pomp, Brian C Jensen

Erratum issuedAbstract read
In one paragraph

Article in Mammalian genome : official journal of the International Mammalian Genome Society, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
  2. Article
  3. Fifteen years of the Diversity Outbred mouse model: a review.Mammalian genome : official journal of the International Mammalian Genome Society · 2026
    Review
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  15. Review
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  17. Using Heterogeneous Stocks for Fine-Mapping Genetically Complex Traits.Methods in molecular biology (Clifton, N.J.) · 2019
    Review
  18. Genome-wide association for testis weight in the diversity outbred mouse population.Mammalian genome : official journal of the International Mammalian Genome Society · 2018
    Article
  19. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

John R ShorterDepartment of Genetics, University of North Carolina, CB# 7264, Chapel Hill, NC, 27599, USA. johnrshorter@gmail.com.
Wei HuangMcAllister Heart Institute, University of North Carolina, Chapel Hill, NC, 27599, USA.
Ju Youn BeakMcAllister Heart Institute, University of North Carolina, Chapel Hill, NC, 27599, USA.
Kunjie HuaDepartment of Genetics, University of North Carolina, CB# 7264, Chapel Hill, NC, 27599, USA.
Daniel M GattiThe Jackson Laboratory, Bar Harbor, ME, 04609, USA.
Fernando Pardo-Manuel de VillenaDepartment of Genetics, University of North Carolina, CB# 7264, Chapel Hill, NC, 27599, USA.
Daniel PompDepartment of Genetics, University of North Carolina, CB# 7264, Chapel Hill, NC, 27599, USA.
Brian C JensenDivision of Cardiology, Department of Medicine, University of North Carolina, 6012 Burnett-Womack Building, Chapel Hill, NC, 27599, USA. brian_jensen@med.unc.edu.
University of North Carolina at Chapel Hill · USJackson Laboratory · US

Funding

UNIV OF NORTH CAROLINA CLINICAL NUTRITION RESEARCH UNITP30DK056350 · NIDDK · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Ian Michael Carroll · 1999 to 2026
$31.6M
Metabolic mechanisms of cardioprotection through alpha-1A adrenergic receptor activationR01HL140067 · NHLBI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Brian C Jensen · 2018 to 2026
$4.2M
Genetic control over the gut microbiome compositionRC1DK087346 · NIDDK · UNIVERSITY OF NEBRASKA LINCOLN · PI BENSON, ANDREW K, POMP, DANIEL · 2009 to 2010
$998k
Genetic Architecture of Voluntary Exercise in MiceR01DK076050 · NIDDK · UNIV OF NORTH CAROLINA CHAPEL HILL · PI POMP, DANIEL · 2007 to 2010
$966k
NHLBI NIH HHS R01 HL140067NIDDK NIH HHS P30 DK056350NIDDK NIH HHS R01 DK076050NIDDK NIH HHS RC1 DK087346NIH HHS DK076050NIH HHS DK087346
6 · The paper itself

Abstract

Heart size is an important factor in cardiac health and disease. In particular, increased heart weight is predictive of adverse cardiovascular outcomes in multiple large community-based studies. We use two cohorts of Diversity Outbred (DO) mice to investigate the role of genetics, sex, age, and diet on heart size. DO mice (n = 289) of both sexes from generation 10 were fed a standard chow diet, and analyzed at 12-15 weeks of age. Another cohort of female DO mice (n = 258) from generation 11 were fed either a high-fat, cholesterol-containing (HFC) diet or a low-fat, high-protein diet, and analyzed at 24-25 weeks. We did not observe an effect of diet on body or heart weight in generation 11 mice, although we previously reported an effect on other cardiovascular risk factors, including cholesterol, triglycerides, and insulin. We do observe a significant genetic effect on heart weight in this population. We identified two quantitative trait loci for heart weight, one (Hwtf1) at a genome-wide significance level of p ≤ 0.05 on MMU15 and one (Hwtf2) at a genome-wide suggestive level of p ≤ 0.1 on MMU10, that together explain 13.3% of the phenotypic variance. Hwtf1 contained collagen type XXII alpha 1 chain (Col22a1), and the NZO/HlLtJ and WSB/EiJ haplotypes were associated with larger hearts. This is consistent with heart tissue Col22a1 expression in DO founders and SNP patterns within Hwtf1 for Col22a1. Col22a1 has been previously associated with cardiac fibrosis in mice, suggesting that Col22a1 may be involved in pathological cardiac hypertrophy.

Indexed as

Genetic VariationAnimalsCholesterolChromosome MappingDietFemaleGenomicsGenotypeHaplotypesHeartMaleMiceOrgan SizePhenotypeQuantitative Trait LociCholesterol

Identifiers

PMID29279960
PMCPMC6340297
OpenAlexW2779765029

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.