Evidence map›Paper›PMID 29279831›Full record

ArticleAdvanced biomedical research2017

Optimal DNA Isolation Method for Detection of Nontuberculous Mycobacteria by Polymerase Chain Reaction.

Samira Mohammadi, Bahram Nasr Esfahani, Sharareh Moghim, Hossein Mirhendi, Fatemeh Riyahi Zaniani, Hajieh Ghasemian Safaei, Hossein Fazeli, Mahshid Salehi

Abstract read
In one paragraph

Article in Advanced biomedical research, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Modified cetyltrimethylammonium bromide DNA extraction forThe Pan African medical journal · 2026
    Article
  2. Article
  3. Toward same-day detection ofFrontiers in microbiology · 2025
    Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Samira MohammadiDepartment of Microbiology, Faculty of Medicine, Isfahan University of Medical Sciences, Isfahan, Iran.
Bahram Nasr EsfahaniDepartment of Microbiology, Faculty of Medicine, Isfahan University of Medical Sciences, Isfahan, Iran.
Sharareh MoghimDepartment of Microbiology, Faculty of Medicine, Isfahan University of Medical Sciences, Isfahan, Iran.
Hossein MirhendiDepartment of Medical Parasitology and Mycology, Faculty of Medicine, Isfahan University of Medical Sciences, Isfahan, Iran.
Fatemeh Riyahi ZanianiDepartment of Microbiology, Faculty of Medicine, Isfahan University of Medical Sciences, Isfahan, Iran.
Hajieh Ghasemian SafaeiDepartment of Microbiology, Faculty of Medicine, Isfahan University of Medical Sciences, Isfahan, Iran.
Hossein FazeliDepartment of Microbiology, Faculty of Medicine, Isfahan University of Medical Sciences, Isfahan, Iran.
Mahshid SalehiRegional Tuberculosis Reference Laboratories in Isfahan, Isfahan, Iran.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundNontuberculous mycobacteria (NTM) are a group of opportunistic pathogens and these are widely dispersed in water and soil resources. Identification of mycobacteria isolates by conventional methods including biochemical tests, growth rates, colony pigmentation, and presence of acid-fast bacilli is widely used, but these methods are time-consuming, labor-intensive, and may sometimes remain inconclusive. MATERIALS AND

methodsThe DNA was extracted from NTM cultures using CTAB, Chelex, Chelex + Nonidet P-40, FTA

resultsThe CTAB method showed more positive results at 1:10-1:100,000 at which the DNA amount was substantial. With the Chelex method of DNA extraction, PCR amplification was detected at 1:10 and 1:1000 dilutions.

conclusionsAccording to the electrophoresis results, the CTAB and Chelex DNA extraction methods were more successful in comparison with the others as regard producing suitable concentrations of DNA with the minimum use of PCR inhibitor.

Indexed as

DNA extraction methodsheat-shock protein 65nontuberculous mycobacteriapolymerase chain reaction

Identifiers

PMID29279831
PMCPMC5674650

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.