Evidence map›Paper›PMID 29274501›Full record

ArticleNeuroImage2018

Using diffusion MRI to discriminate areas of cortical grey matter.

Tharindu Ganepola, Zoltan Nagy, Aurobrata Ghosh, Theodore Papadopoulo, Daniel C Alexander, Martin I Sereno

Abstract read
In one paragraph

Article in NeuroImage, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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  16. Topological Maps and Brain Computations From Low to High.Frontiers in systems neuroscience · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Tharindu GanepolaDepartment of Cognitive, Perceptual and Brain Sciences, UCL, London, UK; Centre for Medical Image Computing, Department of Computer Science, UCL, London, UK. Electronic address: t.ganepola@ucl.ac.uk.
Zoltan NagyLaboratory for Social and Neural Systems Research, UZH, Zurich, Switzerland.
Aurobrata GhoshCentre for Medical Image Computing, Department of Computer Science, UCL, London, UK.
Theodore PapadopouloProject Team Athena, INRIA Sophia Antipolis-Meģditerraneģe, Nice, France.
Daniel C AlexanderCentre for Medical Image Computing, Department of Computer Science, UCL, London, UK.
Martin I SerenoDepartment of Psychology and Neuroimaging Centre, SDSU, San Diego, USA.

Funding

Mapping the Human Connectome: Structure, Function, and HeritabilityU54MH091657 · NIMH · WASHINGTON UNIVERSITY · PI UGURBIL, KAMIL, VAN ESSEN, DAVID C · 2010 to 2014
$34.7M
Cognitive functions of multisensory cortical mapsR01MH081990 · NIMH · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI SERENO, MARTIN IRENAEUS · 2009 to 2013
$1.8M
Medical Research Council MR/M009106/1NIMH NIH HHS R01 MH081990NIMH NIH HHS U54 MH091657
6 · The paper itself

Abstract

Cortical area parcellation is a challenging problem that is often approached by combining structural imaging (e.g., quantitative T1, diffusion-based connectivity) with functional imaging (e.g., task activations, topological mapping, resting state correlations). Diffusion MRI (dMRI) has been widely adopted to analyse white matter microstructure, but scarcely used to distinguish grey matter regions because of the reduced anisotropy there. Nevertheless, differences in the texture of the cortical 'fabric' have long been mapped by histologists to distinguish cortical areas. Reliable area-specific contrast in the dMRI signal has previously been demonstrated in selected occipital and sensorimotor areas. We expand upon these findings by testing several diffusion-based feature sets in a series of classification tasks. Using Human Connectome Project (HCP) 3T datasets and a supervised learning approach, we demonstrate that diffusion MRI is sensitive to architectonic differences between a large number of different cortical areas defined in the HCP parcellation. By employing a surface-based cortical imaging pipeline, which defines diffusion features relative to local cortical surface orientation, we show that we can differentiate areas from their neighbours with higher accuracy than when using only fractional anisotropy or mean diffusivity. The results suggest that grey matter diffusion may provide a new, independent source of information for dividing up the cortex.

Indexed as

Supervised Machine LearningAdultCerebral CortexConnectomeDiffusion Magnetic Resonance ImagingDiffusion Tensor ImagingGray MatterHumansImage Processing, Computer-AssistedNeuroimagingArchitectonicsCortexCortical surfacedMRIGrey matterHARDIParcellationSupervised leaning

Identifiers

PMID29274501
PMCPMC6189525

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.