Evidence map›Paper›PMID 29274070›Full record

ArticleMicrobial ecology2018

The Combined Effect of Temperature and Host Clonal Line on the Microbiota of a Planktonic Crustacean.

Karen E Sullam, Samuel Pichon, Tobias M M Schaer, Dieter Ebert

Abstract read
PubMed Publisher
In one paragraph

Article in Microbial ecology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Karen E SullamZoological Institute, University of Basel, Vesalgasse 1, 4051, Basel, Switzerland. ksullam@gmail.com.
Samuel PichonZoological Institute, University of Basel, Vesalgasse 1, 4051, Basel, Switzerland.
Tobias M M SchaerZoological Institute, University of Basel, Vesalgasse 1, 4051, Basel, Switzerland.
Dieter EbertZoological Institute, University of Basel, Vesalgasse 1, 4051, Basel, Switzerland.

Funding

European Research Council ERC-2010-AdG 268596-MicrobiotaEvolutionSchweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung 310030B_166677
6 · The paper itself

Abstract

Host-associated microbiota vary across host individuals and environmental conditions, but the relative importance of their genetic background versus their environment is difficult to disentangle. We sought to experimentally determine the factors shaping the microbiota of the planktonic Crustacean, Daphnia magna. We used clonal lines from a wide geographic distribution, which had been kept under standardized conditions for over 75 generations. Replicate populations were kept for three generations at 20 and 28 °C. The interaction of the host clonal line and environment (i.e., temperature) influenced microbiota community characteristics, including structure, the relative abundance of common microbial species, and the microbial richness and phylogenetic diversity. We did not find any correlation between host-associated microbiota and the geographic origin of the clones or their temperature tolerance. Our results highlight the prominent effects that host clonal lineage and its interaction with the environment has on host-associated microbiota composition.

Indexed as

Environmental MicrobiologyMicrobiotaTemperatureAnimalsBacteriaBacterial Physiological PhenomenaBiodiversityDaphniaDNA, BacterialEcologyGenotypeHost Microbial InteractionsHost SpecificityPhylogenyRNA, Ribosomal, 16SThermotoleranceDNA, BacterialRNA, Ribosomal, 16S16S rDNADaphnia magnaMicrobial ecologyMicrobiomeTemperature

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.