Evidence map›Paper›PMID 29273769›Full record

ArticleScientific reports2017

Differential miRNA expression in the three-spined stickleback, response to environmental changes.

S M Rastorguev, A V Nedoluzhko, N M Gruzdeva, E S Boulygina, F S Sharko, A S Ibragimova, S V Tsygankova, A V Artemov, K G Skryabin, E B Prokhortchouk

Abstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

S M RastorguevNational Research Center "Kurchatov Institute", Kurchatov sq. 1, 123182, Moscow, Russia. rastorgueff@gmail.com.
A V NedoluzhkoNational Research Center "Kurchatov Institute", Kurchatov sq. 1, 123182, Moscow, Russia.ORCID 0000-0001-7040-0892
N M GruzdevaNational Research Center "Kurchatov Institute", Kurchatov sq. 1, 123182, Moscow, Russia.
E S BoulyginaNational Research Center "Kurchatov Institute", Kurchatov sq. 1, 123182, Moscow, Russia.
F S SharkoInstitute of Bioengineering, Research Center of Biotechnology of the Russian Academy of Sciences. 33, bld. 2 Leninsky Ave, Moscow, 119071, Russia.
A S IbragimovaNational Research Center "Kurchatov Institute", Kurchatov sq. 1, 123182, Moscow, Russia.
S V TsygankovaNational Research Center "Kurchatov Institute", Kurchatov sq. 1, 123182, Moscow, Russia.
A V ArtemovInstitute of Bioengineering, Research Center of Biotechnology of the Russian Academy of Sciences. 33, bld. 2 Leninsky Ave, Moscow, 119071, Russia.
K G SkryabinNational Research Center "Kurchatov Institute", Kurchatov sq. 1, 123182, Moscow, Russia.
E B ProkhortchoukInstitute of Bioengineering, Research Center of Biotechnology of the Russian Academy of Sciences. 33, bld. 2 Leninsky Ave, Moscow, 119071, Russia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

miRNAs play important role in the various physiological and evolutionary processes, however, there is no data allowing comparison of evolutionary differences between various ecotypes adapted to different environmental conditions and specimen demonstrating immediate physiological response to the environmental changes. We compared miRNA expression profiles between marine and freshwater stickleback populations of the three-spined stickleback to identify the evolutionary differences. To study the immediate physiological response to foreign environment, we explored the changes induced by transfer of marine sticklebacks into freshwater environment and vice versa. Comparative analysis of changes in miRNA expression suggested that they are driven by three independent factors: (1) non-specific changes in miRNA expression under different environmental conditions; (2) specific response to freshwater conditions in the marine stickleback ecotype; (3) specific response to extreme osmotic conditions for both marine and freshwater ecotypes during the contact with non-native environment. Gene Ontology enrichment analysis of differential expressed miRNA targets supports our current hypothesis.

Indexed as

EcosystemFresh WaterSeawaterAdaptation, PhysiologicalAnimalsBiological EvolutionGenetic VariationMicroRNAsSmegmamorphaMicroRNAs

Identifiers

PMID29273769
PMCPMC5741757

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.