Evidence map›Paper›PMID 29272518›Full record

ArticleNucleic acids research2018

Triggering nucleic acid nanostructure assembly by conditional kissing interactions.

Laurent Azéma, Servane Bonnet-Salomon, Masayuki Endo, Yosuke Takeuchi, Guillaume Durand, Tomoko Emura, Kumi Hidaka, Eric Dausse, Hiroshi Sugiyama, Jean-Jacques Toulmé

Abstract read
In one paragraph

Article in Nucleic acids research, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Laurent AzémaUniversity of Bordeaux, CNRS UMR 5320, INSERM U1212, Bordeaux 33076, France.
Servane Bonnet-SalomonUniversity of Bordeaux, CNRS UMR 5320, INSERM U1212, Bordeaux 33076, France.
Masayuki EndoDepartment of Chemistry, Graduate School of Science, Kyoto University, Kyoto 606-8502, Japan.
Yosuke TakeuchiDepartment of Chemistry, Graduate School of Science, Kyoto University, Kyoto 606-8502, Japan.
Guillaume DurandUniversity of Bordeaux, CNRS UMR 5320, INSERM U1212, Bordeaux 33076, France.
Tomoko EmuraDepartment of Chemistry, Graduate School of Science, Kyoto University, Kyoto 606-8502, Japan.
Kumi HidakaDepartment of Chemistry, Graduate School of Science, Kyoto University, Kyoto 606-8502, Japan.
Eric DausseUniversity of Bordeaux, CNRS UMR 5320, INSERM U1212, Bordeaux 33076, France.
Hiroshi SugiyamaDepartment of Chemistry, Graduate School of Science, Kyoto University, Kyoto 606-8502, Japan.
Jean-Jacques ToulméUniversity of Bordeaux, CNRS UMR 5320, INSERM U1212, Bordeaux 33076, France.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Nucleic acids are biomolecules of amazing versatility. Beyond their function for information storage they can be used for building nano-objects. We took advantage of loop-loop or kissing interactions between hairpin building blocks displaying complementary loops for driving the assembly of nucleic acid nano-architectures. It is of interest to make the interaction between elementary units dependent on an external trigger, thus allowing the control of the scaffold formation. To this end we exploited the binding properties of structure-switching aptamers (aptaswitch). Aptaswitches are stem-loop structured oligonucleotides that engage a kissing complex with an RNA hairpin in response to ligand-induced aptaswitch folding. We demonstrated the potential of this approach by conditionally assembling oligonucleotide nanorods in response to the addition of adenosine.

Indexed as

AdenosineAptamers, NucleotideBase PairingBase SequenceBinding SitesDNAInverted Repeat SequencesLigandsNanotechnologyNanotubesNucleic Acid ConformationOligonucleotidesRNAAdenosineAptamers, NucleotideDNALigandsOligonucleotidesRNA

Identifiers

PMID29272518
PMCPMC5814900

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.