Evidence map›Paper›PMID 29271191›Full record

ArticleBiochemistry2018

Histidine-Lysine Axial Ligand Switching in a Hemoglobin: A Role for Heme Propionates.

Dillon B Nye, Matthew R Preimesberger, Ananya Majumdar, Juliette T J Lecomte

Abstract readComparative Study
In one paragraph

Article in Biochemistry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.6field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 11 citations in OpenAlex.

  1. Tailorable Tetrahelical Bundles as a Toolkit for Redox Studies.The journal of physical chemistry. B · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Dillon B NyeT. C. Jenkins Department of Biophysics, Johns Hopkins University , Baltimore, Maryland 21218, United States.
Matthew R PreimesbergerT. C. Jenkins Department of Biophysics, Johns Hopkins University , Baltimore, Maryland 21218, United States.
Ananya MajumdarBiomolecular NMR Center, Johns Hopkins University , Baltimore, Maryland 21218, United States.
Juliette T J LecomteT. C. Jenkins Department of Biophysics, Johns Hopkins University , Baltimore, Maryland 21218, United States.ORCID 0000-0003-1116-0053
Johns Hopkins University · US

Funding

PROGRAM IN MOLECULAR BIOPHYSICST32GM008403 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI BARRICK, DOUGLAS E. · 1990 to 2019
$13.5M
The Chemistry-Biology Interface Program at Johns Hopkins UniversityT32GM080189 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI ROKITA, STEVEN E · 2008 to 2022
$3.5M
NIGMS NIH HHS T32 GM008403NIGMS NIH HHS T32 GM080189
6 · The paper itself

Abstract

The hemoglobin of Synechococcus sp. PCC 7002, GlbN, is a monomeric group I truncated protein (TrHb1) that coordinates the heme iron with two histidine ligands at neutral pH. One of these is the distal histidine (His46), a residue that can be displaced by dioxygen and other small molecules. Here, we show with mutagenesis, electronic absorption spectroscopy, and nuclear magnetic resonance (NMR) spectroscopy that at high pH and exclusively in the ferrous state, Lys42 competes with His46 for the iron coordination site. When b heme is originally present, the population of the lysine-bound species remains too small for detailed characterization; however, the population can be increased significantly by using dimethyl-esterified heme. Electronic absorption and NMR spectroscopies showed that the reversible ligand switching process occurs with an apparent pK

Indexed as

Amino Acid SequenceBacterial ProteinsCoordination ComplexesEsterificationHemeHistidineHydrogen-Ion ConcentrationIronLysineModels, MolecularNuclear Magnetic Resonance, BiomolecularPressurePropionatesProtein ConformationProtein FoldingProtoporphyrinsBacterial ProteinsCoordination ComplexesGlbN protein, bacteriaHemeHistidineIroniron protoporphyrin IXLysinePropionatesProtoporphyrinsRecombinant ProteinsTruncated Hemoglobins

Identifiers

PMID29271191
PMCPMC6214620
OpenAlexW2778741038

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.