Evidence map›Paper›PMID 29270290›Full record

ArticleAntimicrobial resistance and infection control2017

Can a toxin gene NAAT be used to predict toxin EIA and the severity of

Mark I Garvey, Craig W Bradley, Martyn A C Wilkinson, Elisabeth Holden

Abstract read
In one paragraph

Article in Antimicrobial resistance and infection control, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Comparative evaluation of the STANDARD M10 and XpertJournal of clinical microbiology · 2024
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  6. Novel Biomarkers, IncludingInfection and immunity · 2023
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  7. Validation of Clinical Risk Models for Clostridioides difficileAntimicrobial agents and chemotherapy · 2022
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  8. Antibiotics (Basel, Switzerland) · 2022
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  9. Article
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  11. The Role of Diagnostic Stewardship inCurrent infectious disease reports · 2020
    Article
  12. Laboratory Tests for the Diagnosis ofClinics in colon and rectal surgery · 2020
    Review
  13. Treatment of Severe and Fulminnant Clostridioides difficile Infection.Current treatment options in gastroenterology · 2019
    Review
  14. Observational
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Mark I GarveyUniversity Hospitals Birmingham NHS Foundation Trust, Queen Elizabeth Hospital Birmingham, B15 2WB, Edgbaston, Birmingham, UK.ORCID 0000-0001-7324-5306
Craig W BradleyUniversity Hospitals Birmingham NHS Foundation Trust, Queen Elizabeth Hospital Birmingham, B15 2WB, Edgbaston, Birmingham, UK.
Martyn A C WilkinsonUniversity Hospitals Birmingham NHS Foundation Trust, Queen Elizabeth Hospital Birmingham, B15 2WB, Edgbaston, Birmingham, UK.
Elisabeth HoldenUniversity Hospitals Birmingham NHS Foundation Trust, Queen Elizabeth Hospital Birmingham, B15 2WB, Edgbaston, Birmingham, UK.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Diagnosis of Methods: A three-stage algorithm was employed for CDI testing, comprising a screening test for glutamate dehydrogenase (GDH), followed by a NAAT, then a toxin enzyme immunoassay (EIA). All diarrhoeal samples positive for GDH and NAAT between 2012 and 2016 were analysed. The performance of the NAAT CT value as a classifier of toxin EIA outcome was analysed using a ROC curve; patient mortality was compared to CTs and toxin EIA via linear regression models. Results: A CT value ≤26 was associated with ≥72% toxin EIA positivity; applying a logistic regression model we demonstrated an association between low CT values and toxin EIA positivity. A CT value of ≤26 was significantly associated ( Discussions: Here we demonstrate that a CT ≤26 indicates more severe CDI and is associated with higher mortality. Samples with a low CT value are often toxin EIA positive, questioning the need for this additional EIA test. Conclusions: A CT ≤26 could be used to assess the potential for severity of CDI and guide patient treatment.

Indexed as

Immunoenzyme TechniquesNucleic Acid Amplification TechniquesBacterial ProteinsBacterial ToxinsClostridioides difficileClostridium InfectionsGlutamate DehydrogenaseHumansBacterial ProteinsBacterial ToxinsGlutamate DehydrogenasetoxB protein, Clostridium difficileC. difficile InfectionClostridium DifficileEIAMortalityNAATSeverity

Identifiers

PMID29270290
PMCPMC5735516

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.