Evidence map›Paper›PMID 29268782›Full record

ArticleHuman genomics2017

Overexpressed HSF1 cancer signature genes cluster in human chromosome 8q.

Christopher Q Zhang, Heinric Williams, Thomas L Prince, Eric S Ho

Open access · goldAbstract read
In one paragraph

Article in Human genomics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed, 1 pooled it
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 1 synthesis or guideline pooled it, 20 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Heat Shock Proteins and HSF1 in Cancer.Frontiers in oncology · 2022
    Review
  8. Article
  9. Article
  10. Review
  11. Review
  12. The Multifaceted Role of HSF1 in Tumorigenesis.Advances in experimental medicine and biology · 2020
    Review
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Christopher Q ZhangDepartment of Biology, Lafayette College, Easton, PA, 18042, USA.
Heinric WilliamsUrology Department, Geisinger Medical Center, Danville, PA, 17822, USA.
Thomas L PrinceUrology Department, Geisinger Medical Center, Danville, PA, 17822, USA.
Eric S HoDepartment of Biology, Lafayette College, Easton, PA, 18042, USA. hoe@lafayette.edu.
Geisinger Medical Center · USLafayette College · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundHSF1 (heat shock factor 1) is a transcription factor that is found to facilitate malignant cancer development and proliferation. In cancer cells, HSF1 mediates a set of genes distinct from heat shock that contributes to malignancy. This set of genes is known as the HSF1 Cancer Signature genes or simply HSF1-CanSig genes. HSF1-CanSig genes function and operate differently than typical cancer-causing genes, yet it is involved in fundamental oncogenic processes.

resultsBy utilizing expression data from 9241 cancer patients, we identified that human chromosome 8q21-24 is a location hotspot for the most frequently overexpressed HSF1-CanSig genes. Intriguingly, the strength of the HSF1 cancer program correlates with the number of overexpressed HSF1-CanSig genes in 8q, illuminating the essential role of HSF1 in mediating gene expression in different cancers. Chromosome 8q21-24 is found under selective pressure in preserving gene order as it exhibits strong synteny among human, mouse, rat, and bovine, although the biological significance remains unknown. Statistical modeling, hierarchical clustering, and gene ontology-based pathway analyses indicate crosstalk between HSF1-mediated responses and pre-mRNA 3' processing in cancers.

conclusionsOur results confirm the unique role of chromosome 8q mediated by the master regulator HSF1 in cancer cases. Additionally, this study highlights the connection between cellular processes triggered by HSF1 and pre-mRNA 3' processing in cancers.

Indexed as

Chromosomes, Human, Pair 8Gene Expression Regulation, NeoplasticAnimalsBiomarkers, TumorCattleGene Regulatory NetworksGenome, HumanHeat Shock Transcription FactorsHumansMiceNeoplasmsPromoter Regions, GeneticRatsRNA Processing, Post-TranscriptionalTumor Cells, CulturedBiomarkers, TumorHeat Shock Transcription FactorsHSF1 protein, humanChromosome 8qHeat shock factor 1 (HSF1)HSF1 cancer signature (CanSig)MalignancyPre-mRNA 3′ processingSynteny

Identifiers

PMID29268782
PMCPMC5740759
OpenAlexW2777217140

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.