Evidence map›Paper›PMID 29268739›Full record

Trial reportRespiratory research2017

Nasal gene expression differentiates COPD from controls and overlaps bronchial gene expression.

Ilse M Boudewijn, Alen Faiz, Katrina Steiling, Erica van der Wiel, Eef D Telenga, Susan J M Hoonhorst, Nick H T Ten Hacken, Corry-Anke Brandsma, Huib A M Kerstjens, Wim Timens and 14 more

3 registry-linked trialsOpen access · goldAbstract readClinical Trial
In one paragraph

Trial report in Respiratory research, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to 3 registered trials, which are not on this map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
3.3field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT00807469 unknown statusnot on this map

Acute and Chronic Inflammatory Responses Induced by Smoking in Individuals Being Susceptible and Non-Susceptible for Development of COPD: From Specific Disease Phenotyping Towards Novel Made Therapy (Study 1)

TypeobservationalSponsorTop Institute PharmaRan2009 to 2015Enrolled120ConditionsChronic Obstructive Pulmonary Disease
NCT00848406 completednot on this map

An Observational Study to Obtain Normal Values of Inflammatory Variables in Induced Sputum, Exhaled Breath, and Bronchial Biopsies From Healthy Smoking and Non-smoking Individuals

TypeobservationalSponsorUniversity Medical Center GroningenRan2009 to 2015Enrolled120ConditionsAsthma, Copd
NCT01351792 phase3terminatednot on this map

A 12-week, Multicentre, Randomised, Double-blind, Double-dummy, 2-arm Parallel Group Study Comparing the Efficacy and Safety of Foster® 100/6 (Beclomethasone Dipropionate 100 µg Plus Formoterol 6 µg/Actuation), 2 Puffs b.i.d., Versus Symbicort® 200/6 (Budesonide 200 µg Plus Formoterol 6 µg/Actuation), 2 Inhalations b.i.d., on Parameters of Small Airway Function in Patients With Chronic Obstructive Pulmonary Disease.

TypeinterventionalSponsorChiesi Farmaceutici S.p.A.Ran2011 to 2012Enrolled113ConditionsChronic Obstructive Pulmonary DiseaseArmsFoster® 100/6 µg/unit dose, Symbicort® Turbohaler® 200/6 μg/actuation
3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 56 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors at 7 institutions in 2 countries.

Ilse M BoudewijnUniversity of Groningen, University Medical Center Groningen, Department of Pulmonary Diseases, Groningen, the Netherlands. i.m.boudewijn@umcg.nl.ORCID 0000-0003-0438-696X
Alen FaizUniversity of Groningen, University Medical Center Groningen, Department of Pulmonary Diseases, Groningen, the Netherlands.
Katrina SteilingDivision of Computational Biomedicine, Boston University School of Medicine, Boston, MA, USA.
Erica van der WielUniversity of Groningen, University Medical Center Groningen, Department of Pulmonary Diseases, Groningen, the Netherlands.
Eef D TelengaUniversity of Groningen, University Medical Center Groningen, Department of Pulmonary Diseases, Groningen, the Netherlands.
Susan J M HoonhorstUniversity of Groningen, University Medical Center Groningen, Department of Pulmonary Diseases, Groningen, the Netherlands.
Nick H T Ten HackenUniversity of Groningen, University Medical Center Groningen, Department of Pulmonary Diseases, Groningen, the Netherlands.
Corry-Anke BrandsmaUniversity of Groningen, University Medical Center Groningen, Groningen Research Institute for Asthma and COPD, Groningen, the Netherlands.
Huib A M KerstjensUniversity of Groningen, University Medical Center Groningen, Department of Pulmonary Diseases, Groningen, the Netherlands.
Wim TimensUniversity of Groningen, University Medical Center Groningen, Groningen Research Institute for Asthma and COPD, Groningen, the Netherlands.
Irene H HeijinkUniversity of Groningen, University Medical Center Groningen, Department of Pulmonary Diseases, Groningen, the Netherlands.
Marnix R JonkerUniversity of Groningen, University Medical Center Groningen, Department of Pathology, section Medical Biology, Groningen, the Netherlands.
Harold G de BruinUniversity of Groningen, University Medical Center Groningen, Department of Pathology, section Medical Biology, Groningen, the Netherlands.
J Sebastiaan VroegopMartini Hospital, Department of Pulmonary Diseases, Groningen, the Netherlands.
Henk R PasmaMedical Center Leeuwarden, Department of Pulmonary Diseases, Leeuwarden, the Netherlands.
Wim G BoersmaNoordwest Ziekenhuisgroep, Department of Pulmonary Diseases, Alkmaar, the Netherlands.
Pascal WieldersCatharina Hospital, Department of Pulmonary Diseases, Eindhoven, the Netherlands.
Frank van den ElshoutRijnstate Hospital, Department of Pulmonary Diseases, Arnhem, the Netherlands.
Khaled MansourOrbis Concern, Department of Pulmonary Diseases, Sittard, the Netherlands.
Avrum SpiraDivision of Computational Biomedicine, Boston University School of Medicine, Boston, MA, USA.
Marc E LenburgDivision of Computational Biomedicine, Boston University School of Medicine, Boston, MA, USA.
Victor GuryevEuropean Research Institute for the Biology of Ageing, University of Groningen, University Medical Center Groningen, Groningen, the Netherlands.
Dirkje S PostmaUniversity of Groningen, University Medical Center Groningen, Department of Pulmonary Diseases, Groningen, the Netherlands.
Maarten van den BergeUniversity of Groningen, University Medical Center Groningen, Department of Pulmonary Diseases, Groningen, the Netherlands.
University Medical Center Groningen · NLBoston University · USMartini Ziekenhuis · NLMedisch Centrum Leeuwarden · NLNoordwest Ziekenhuisgroep · NLRadboud University Nijmegen · NLRijnstate Hospital · NL

Funding

BIOLOGY OF THE LUNG--MULTIDISCIPLINARY PROGRAMT32HL007035 · NHLBI · BOSTON UNIVERSITY MEDICAL CAMPUS · PI Darrell N. Kotton, JOSEPH P MIZGERD · 1985 to 2026
$24.3M
Linking airway genomics to the pathogenesis and clinical heterogeneity of COPDR01HL095388 · NHLBI · BOSTON UNIVERSITY MEDICAL CAMPUS · PI LENBURG, MARC ELLIOTT, SPIRA, AVRUM E · 2008 to 2011
$2.9M
Boston University Clinical and Translational Science Award (CTSA) Program KL2KL2RR025770 · NCRR · BOSTON UNIVERSITY MEDICAL CAMPUS · PI CENTER, DAVID M. · 2008 to 2011
$1.3M
Center for Integration of Medicine and Innovative Technology CIMIT Young Clinician Research AwardNCRR NIH HHS KL2 RR025770NHLBI NIH HHS R01 HL095388NHLBI NIH HHS T32 HL007035NIH HHS KL2RR025770NIH HHS NIH/NHLBI 1R01 HL095388RESPIRE2 fellowship PCOFUNDGA-2012-600368
6 · The paper itself

Abstract

backgroundNasal gene expression profiling is a promising method to characterize COPD non-invasively. We aimed to identify a nasal gene expression profile to distinguish COPD patients from healthy controls. We investigated whether this COPD-associated gene expression profile in nasal epithelium is comparable with the profile observed in bronchial epithelium.

methodsGenome wide gene expression analysis was performed on nasal epithelial brushes of 31 severe COPD patients and 22 controls, all current smokers, using Affymetrix Human Gene 1.0 ST Arrays. We repeated the gene expression analysis on bronchial epithelial brushes in 2 independent cohorts of mild-to-moderate COPD patients and controls.

resultsIn nasal epithelium, 135 genes were significantly differentially expressed between severe COPD patients and controls, 21 being up- and 114 downregulated in COPD (false discovery rate < 0.01). Gene Set Enrichment Analysis (GSEA) showed significant concordant enrichment of COPD-associated nasal and bronchial gene expression in both independent cohorts (FDR

conclusionWe identified a nasal gene expression profile that differentiates severe COPD patients from controls. Of interest, part of the nasal gene expression changes in COPD mimics differentially expressed genes in the bronchus. These findings indicate that nasal gene expression profiling is potentially useful as a non-invasive biomarker in COPD.

trial registrationClinicalTrials.gov registration number NCT01351792 (registration date May 10, 2011), ClinicalTrials.gov registration number NCT00848406 (registration date February 19, 2009), ClinicalTrials.gov registration number NCT00807469 (registration date December 11, 2008).

Indexed as

AdultAgedBronchiCohort StudiesFemaleGene ExpressionHumansMaleMiddle AgedNasal MucosaPulmonary Disease, Chronic ObstructiveBronchial epitheliumCOPDGenome wide gene expressionMicroarrayNasal epithelium

Identifiers

PMID29268739
PMCPMC5740586
OpenAlexW2779651847

What OpenQuestion holds

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LicenceCC BY
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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.