Evidence map›Paper›PMID 29267322›Full record

ArticlePloS one2017

Characterization of Salmonella enterica isolates causing bacteremia in Lima, Peru, using multiple typing methods.

Claudia Silva, Laura Betancor, Coralith García, Lizeth Astocondor, Noemí Hinostroza, Julieta Bisio, Javier Rivera, Lucía Perezgasga, Victoria Pérez Escanda, Lucía Yim and 5 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
3.7field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 21 citations in OpenAlex.

  1. Genomic characterization of a clonal emergentApplied and environmental microbiology · 2024
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  4. WGS-Based Lineage and Antimicrobial Resistance Pattern ofAntibiotics (Basel, Switzerland) · 2022
    Article
  5. In Silico Detection of Antimicrobial Resistance Integrons inAntibiotics (Basel, Switzerland) · 2021
    Article
  6. High similarity and high frequency of virulence genes among Salmonella Dublin strains isolated over a 33-year period in Brazil.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2020
    Article
  7. Article
  8. Article
  9. Characterization of ESBL-ProducingThe American journal of tropical medicine and hygiene · 2019
    Article
  10. Analysis ofTropical life sciences research · 2019
    Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 5 institutions in 5 countries.

Claudia SilvaDepartamento de Microbiología Molecular, Instituto de Biotecnología, Universidad Nacional Autónoma de México, Cuernavaca, Morelos, Mexico.ORCID 0000-0003-0104-8412
Laura BetancorInstituto de Higiene, Facultad de Medicina, Universidad de la República, Montevideo, Uruguay.
Coralith GarcíaInstituto de Medicina Tropical Alexander von Humboldt, Universidad Peruana Cayetano Heredia, Lima, Peru.
Lizeth AstocondorInstituto de Medicina Tropical Alexander von Humboldt, Universidad Peruana Cayetano Heredia, Lima, Peru.
Noemí HinostrozaInstituto de Medicina Tropical Alexander von Humboldt, Universidad Peruana Cayetano Heredia, Lima, Peru.
Julieta BisioInstituto de Higiene, Facultad de Medicina, Universidad de la República, Montevideo, Uruguay.
Javier RiveraPrograma de Ingeniería Genómica, Centro de Ciencias Genómicas, Universidad Nacional Autónoma de México, Cuernavaca, Morelos, Mexico.
Lucía PerezgasgaDepartamento de Microbiología Molecular, Instituto de Biotecnología, Universidad Nacional Autónoma de México, Cuernavaca, Morelos, Mexico.
Victoria Pérez EscandaInstituto de Higiene, Facultad de Medicina, Universidad de la República, Montevideo, Uruguay.
Lucía YimInstituto de Higiene, Facultad de Medicina, Universidad de la República, Montevideo, Uruguay.
Jan JacobsInstitute of Tropical Medicine Antwerp, Antwerp, Belgium.
Francisco García-Del PortilloLaboratorio of Patógenos Bacterianos Intracelulares, Centro Nacional de Biotecnología-Consejo Superior de Investigaciones Científicas (CNB-CSIC), Madrid, Spain.
SalmoIber CYTED Network
José A ChabalgoityInstituto de Higiene, Facultad de Medicina, Universidad de la República, Montevideo, Uruguay.
José L PuenteDepartamento de Microbiología Molecular, Instituto de Biotecnología, Universidad Nacional Autónoma de México, Cuernavaca, Morelos, Mexico.
Universidad de la República de Uruguay · UYUniversidad Nacional Autónoma de México · MXUniversidad Peruana Cayetano Heredia · PEConsejo Superior de Investigaciones Científicas · ESInstituut voor Tropische Geneeskunde · BE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In this study, different molecular typing tools were applied to characterize 95 Salmonella enterica blood isolates collected between 2008 and 2013 from patients at nine public hospitals in Lima, Peru. Combined results of multiplex PCR serotyping, two- and seven-loci multilocus sequence typing (MLST) schemes, serotyping, IS200 amplification and RAPD fingerprints, showed that these infections were caused by eight different serovars: Enteritidis, Typhimurium, Typhi, Choleraesuis, Dublin, Paratyphi A, Paratyphi B and Infantis. Among these, Enteritidis, Typhimurium and Typhi were the most prevalent, representing 45, 36 and 11% of the isolates, respectively. Most isolates (74%) were not resistant to ten primarily used antimicrobial drugs; however, 37% of the strains showed intermediate susceptibility to ciprofloxacin (ISC). Antimicrobial resistance integrons were carried by one Dublin (dfra1 and aadA1) and two Infantis (aadA1) isolates. The two Infantis isolates were multidrug resistant and harbored a large megaplasmid. Amplification of spvC and spvRA regions showed that all Enteritidis (n = 42), Typhimurium (n = 34), Choleraesuis (n = 3) and Dublin (n = 1) isolates carried the Salmonella virulence plasmid (pSV). We conclude that the classic serotyping method can be substituted by the multiplex PCR and, when necessary, sequencing of only one or two loci of the MLST scheme is a valuable tool to confirm the results. The effectiveness and feasibility of different typing tools is discussed.

Indexed as

AnimalsBacteremiaHumansMultiplex Polymerase Chain ReactionSalmonella enterica

Identifiers

PMID29267322
PMCPMC5739443
OpenAlexW2777374221

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.