Evidence map›Paper›PMID 29263845›Full record

ArticleNPJ genomic medicine2017

Circular RNA expression is abundant and correlated to aggressiveness in early-stage bladder cancer.

Trine Line Hauge Okholm, Morten Muhlig Nielsen, Mark P Hamilton, Lise-Lotte Christensen, Søren Vang, Jakob Hedegaard, Thomas Birkballe Hansen, Jørgen Kjems, Lars Dyrskjøt, Jakob Skou Pedersen

Open access · goldAbstract read
In one paragraph

Article in NPJ genomic medicine, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 72 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
72citing papers in PubMed, 2 pooled it
5.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

72 citing papers in PubMed, 2 syntheses or guidelines pooled it, 136 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
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  11. Circular RNA as a source of neoantigens for cancer vaccines.Journal for immunotherapy of cancer · 2024
    Article
  12. Directed Circularization of a Short RNA.Methods in molecular biology (Clifton, N.J.) · 2024
    Article
  13. Article
  14. Review
  15. Exploring circular MET RNA as a potential biomarker in tumors exhibiting high MET activity.Journal of experimental & clinical cancer research : CR · 2023
    Article
  16. Article
  17. Article
  18. Review
  19. Review
  20. Article

12 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Trine Line Hauge OkholmDepartment of Molecular Medicine (MOMA), Aarhus University Hospital, Aarhus, 8200 Denmark.
Morten Muhlig NielsenDepartment of Molecular Medicine (MOMA), Aarhus University Hospital, Aarhus, 8200 Denmark.
Mark P HamiltonDepartment of Molecular and Cellular Biology, Baylor College of Medicine, Houston, TX 77030 USA.
Lise-Lotte ChristensenDepartment of Molecular Medicine (MOMA), Aarhus University Hospital, Aarhus, 8200 Denmark.
Søren VangDepartment of Molecular Medicine (MOMA), Aarhus University Hospital, Aarhus, 8200 Denmark.
Jakob HedegaardDepartment of Molecular Medicine (MOMA), Aarhus University Hospital, Aarhus, 8200 Denmark.
Thomas Birkballe HansenDepartment of Molecular Biology and Genetics (MBG), and Interdisciplinary Nanoscience Center (iNANO), Aarhus University, Aarhus, 8000 Denmark.
Jørgen KjemsDepartment of Molecular Biology and Genetics (MBG), and Interdisciplinary Nanoscience Center (iNANO), Aarhus University, Aarhus, 8000 Denmark.
Lars Dyrskjøt *Department of Molecular Medicine (MOMA), Aarhus University Hospital, Aarhus, 8200 Denmark.
Jakob Skou Pedersen *Department of Molecular Medicine (MOMA), Aarhus University Hospital, Aarhus, 8200 Denmark.ORCID 0000-0002-7236-4001
Aarhus University Hospital · DKAarhus University · DKBaylor College of Medicine · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The functions and biomarker potential of circular RNAs (circRNAs) in various cancer types are a rising field of study, as emerging evidence relates circRNAs to tumorigenesis. Here, we profiled the expression of circRNAs in 457 tumors from patients with non-muscle-invasive bladder cancer (NMIBC). We show that a set of highly expressed circRNAs have conserved core splice sites, are associated with Alu repeats, and enriched with Synonymous Constraint Elements as well as microRNA target sites. We identified 113 abundant circRNAs that are differentially expressed between high and low-risk tumor subtypes. Analysis of progression-free survival revealed 13 circRNAs, among them circHIPK3 and circCDYL, where expression correlated with progression independently of the linear transcript and the host gene. In summary, our results demonstrate that abundant circRNAs possess multiple biological features, distinguishing them from low-expressed circRNAs and non-circularized exons, and suggest that circRNAs might serve as a new class of prognostic biomarkers in NMIBC.

Identifiers

PMID29263845
PMCPMC5705701
OpenAlexW2769746516

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.