Evidence map›Paper›PMID 29263263›Full record

ArticleJournal of virology2018

Identification of Residues Controlling Restriction versus Enhancing Activities of IFITM Proteins on Entry of Human Coronaviruses.

Xuesen Zhao, Mohit Sehgal, Zhifei Hou, Junjun Cheng, Sainan Shu, Shuo Wu, Fang Guo, Sylvain J Le Marchand, Hanxin Lin, Jinhong Chang and 1 more

Abstract read
In one paragraph

Article in Journal of virology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 81 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
81citing papers in PubMed, 1 pooled it
5.3field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

81 citing papers in PubMed, 1 synthesis or guideline pooled it, 132 citations in OpenAlex.

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21 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 3 countries.

Xuesen ZhaoBeijing Ditan Hospital, Capital Medical University, Beijing, China zhaoxuesen@ccmu.edu.cn ju-tao.guo@bblumberg.org.
Mohit SehgalBaruch S. Blumberg Institute, Hepatitis B Foundation, Doylestown, Pennsylvania, USA.
Zhifei HouBeijing Ditan Hospital, Capital Medical University, Beijing, China.
Junjun ChengBaruch S. Blumberg Institute, Hepatitis B Foundation, Doylestown, Pennsylvania, USA.
Sainan ShuBaruch S. Blumberg Institute, Hepatitis B Foundation, Doylestown, Pennsylvania, USA.
Shuo WuBaruch S. Blumberg Institute, Hepatitis B Foundation, Doylestown, Pennsylvania, USA.
Fang GuoBaruch S. Blumberg Institute, Hepatitis B Foundation, Doylestown, Pennsylvania, USA.
Sylvain J Le MarchandDepartment of Biology, Drexel University, Philadelphia, Pennsylvania, USA.
Hanxin LinDepartment of Pathology and Laboratory Medicine, Western University, London, Ontario, Canada.
Jinhong ChangBaruch S. Blumberg Institute, Hepatitis B Foundation, Doylestown, Pennsylvania, USA.
Ju-Tao GuoBaruch S. Blumberg Institute, Hepatitis B Foundation, Doylestown, Pennsylvania, USA zhaoxuesen@ccmu.edu.cn ju-tao.guo@bblumberg.org.
Baruch S. Blumberg Institute · USHepatitis B Foundation · USCapital Medical University · CNDrexel University · USWestern University · CA

Funding

Evaulation of therapeutic benefits of HBV nucleocapsid assembly inhibitorsR01AI113267 · NIAID · DREXEL UNIVERSITY · PI DU, YANMING, GUO, JU-TAO · 2014 to 2018
$2.9M
NIAID NIH HHS R01 AI113267
6 · The paper itself

Abstract

Interferon-induced transmembrane proteins (IFITMs) are restriction factors that inhibit the infectious entry of many enveloped RNA viruses. However, we demonstrated previously that human IFITM2 and IFITM3 are essential host factors facilitating the entry of human coronavirus (HCoV) OC43. In a continuing effort to decipher the molecular mechanism underlying IFITM differential modulation of HCoV entry, we investigated the roles of structural motifs important for IFITM protein posttranslational modifications, intracellular trafficking, and oligomerization in modulating the entry of five HCoVs. We found that three distinct mutations in IFITM1 or IFITM3 converted the host restriction factors to enhance entry driven by the spike proteins of severe acute respiratory syndrome coronavirus (SARS-CoV) and/or Middle East respiratory syndrome coronavirus (MERS-CoV). First, replacement of IFITM3 tyrosine 20 with either alanine or aspartic acid to mimic unphosphorylated or phosphorylated IFITM3 reduced its activity to inhibit the entry of HCoV-NL63 and -229E but enhanced the entry of SARS-CoV and MERS-CoV. Second, replacement of IFITM3 tyrosine 99 with either alanine or aspartic acid reduced its activity to inhibit the entry of HCoV-NL63 and SARS-CoV but promoted the entry of MERS-CoV. Third, deletion of the carboxyl-terminal 12 amino acid residues from IFITM1 enhanced the entry of MERS-CoV and HCoV-OC43. These findings suggest that these residues and structural motifs of IFITM proteins are key determinants for modulating the entry of HCoVs, most likely through interaction with viral and/or host cellular components at the site of viral entry to modulate the fusion of viral envelope and cellular membranes.

Indexed as

Mutation, MissenseProtein MultimerizationVirus InternalizationAmino Acid MotifsAmino Acid SubstitutionAntigens, DifferentiationCell Line, TumorCoronavirusHumansMembrane ProteinsRNA-Binding ProteinsSpike Glycoprotein, CoronavirusAntigens, DifferentiationIFITM2 protein, humanIFITM3 protein, humanleu-13 antigenMembrane ProteinsRNA-Binding ProteinsSpike Glycoprotein, CoronaviruscoronavirusIFITMviral entry

Identifiers

PMID29263263
PMCPMC5827390
OpenAlexW2779096414

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.