Evidence map›Paper›PMID 29259843›Full record

ArticlePeerJ2017

Tris(1,3-dichloro-2-propyl) phosphate disrupts dorsoventral patterning in zebrafish embryos.

Subham Dasgupta, Sara M Vliet, Allison Kupsco, Jessica K Leet, Diego Altomare, David C Volz

Open access · goldAbstract read
In one paragraph

Article in PeerJ, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 33 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Subham DasguptaDepartment of Environmental Sciences, University of California, Riverside, CA, United States of America.
Sara M VlietDepartment of Environmental Sciences, University of California, Riverside, CA, United States of America.
Allison KupscoDepartment of Environmental Sciences, University of California, Riverside, CA, United States of America.
Jessica K LeetUniversity of South Carolina, Columbia, SC, United States of America.
Diego AltomareUniversity of South Carolina, Columbia, SC, United States of America.
David C VolzDepartment of Environmental Sciences, University of California, Riverside, CA, United States of America.
University of California, Riverside · USUniversity of South Carolina · US

Funding

DEVELOPMENTAL TOXICITY OF ORGANOPHOSPHATE-BASED FLAME RETARDANTSR01ES027576 · NIEHS · UNIVERSITY OF CALIFORNIA RIVERSIDE · PI VOLZ, DAVID C. · 2017 to 2021
$1.9M
DEVELOPMENTAL TOXICITY OF ORGANOPHOSPHATE-BASED FLAME RETARDANTSR21ES022797 · NIEHS · UNIVERSITY OF SOUTH CAROLINA AT COLUMBIA · PI VOLZ, DAVID C. · 2014 to 2015
$418k
NIEHS NIH HHS R01 ES027576NIEHS NIH HHS R21 ES022797
6 · The paper itself

Abstract

Tris(1,3-dichloro-2-propyl) phosphate (TDCIPP) is a high-production volume organophosphate flame retardant widely used within the United States. Within zebrafish, initiation of TDCIPP exposure at 0.75 h post-fertilization (hpf) results in genome-wide alterations in methylation during cleavage (2 hpf) as well as epiboly delay or arrest (at higher concentrations) during late-blastula and early-gastrula (4-6 hpf). To determine whether these TDCIPP-induced effects were associated with impacts on the transcriptome, embryos were exposed to vehicle (0.1% DMSO) or 2 µM TDCIPP from 0.75 hpf to 6 hpf, and total RNA was extracted from triplicate embryo pools per treatment and hybridized onto duplicate Affymetrix Zebrafish Gene 1.0 ST Arrays per RNA sample. Based on transcriptome-wide profiling, TDCIPP resulted in a significant impact on biological processes involved in dorsoventral patterning and bone morphogenetic protein (BMP) signaling. Consistent with these responses, TDCIPP exposure also resulted in strongly dorsalized embryos by 24 hpf-a phenotype that mimicked the effects of dorsomorphin, a potent and selective BMP inhibitor. Moreover, the majority of dorsalized embryos were preceded by epiboly arrest at 6 hpf. Our microarray data also revealed that the expression of sizzled (

Indexed as

Dorsoventral patterningEmbryoFlame retardantPublic healthTDCIPPZebrafish

Identifiers

PMID29259843
PMCPMC5733366
OpenAlexW2773028103

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.