Evidence map›Paper›PMID 29259792›Full record

ArticleBMJ open gastroenterology2017

PCR detection of segmented filamentous bacteria in the terminal ileum of patients with ulcerative colitis.

Alessia Finotti, Jessica Gasparello, Ilaria Lampronti, Lucia Carmela Cosenza, Giovanni Maconi, Vincenzo Matarese, Valentina Gentili, Dario Di Luca, Roberto Gambari, Michele Caselli

Open access · goldAbstract read
In one paragraph

Article in BMJ open gastroenterology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.6field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Alessia FinottiDepartment of Life Sciences and Biotechnology, University of Ferrara, Ferrara, Italy.
Jessica GasparelloDepartment of Life Sciences and Biotechnology, University of Ferrara, Ferrara, Italy.
Ilaria LamprontiDepartment of Life Sciences and Biotechnology, University of Ferrara, Ferrara, Italy.
Lucia Carmela CosenzaDepartment of Life Sciences and Biotechnology, University of Ferrara, Ferrara, Italy.
Giovanni MaconiDepartment of Gastroenterology, Sacco Hospital, University of Milan, Milan, Italy.
Vincenzo MatareseDepartment of Gastroenterology, Hospital of Ferrara, Ferrara, Italy.
Valentina GentiliDepartment of Medical Sciences, University of Ferrara, Ferrara, Italy.
Dario Di LucaDepartment of Medical Sciences, University of Ferrara, Ferrara, Italy.
Roberto GambariDepartment of Life Sciences and Biotechnology, University of Ferrara, Ferrara, Italy.
Michele CaselliSchool of Gastroenterology, University of Ferrara, Ferrara, Italy.
University of Ferrara · ITUniversity of Milan · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectivesSegmented filamentous bacteria (SFB) have been detected in a wide range of different animal. Recently, the presence of SFB-like bacteria was shown in biopsies of the terminal ileum and ileocecal valve of both patients with ulcerative colitis and control subjects. The aim of this study was to verify whether PCR methods could be used for the detection of SFB in biopsy of patients with ulcerative colitis and its relationships with the disease stage.

methodsPCR methods were used to identify SFB in biopsies from the terminal ileum of patients with ulcerative colitis, showing that this approach represents a useful tool for the detection of SFB presence and analysis of the bacterial load.

resultsOur analysis detected SFB in all faecal samples of children at the time of weaning, and also show that putative SFB sequences are present in both patients with ulcerative colitis and control subjects. Results obtained using real-time quantitative PCR analysis confirm the presence of putative SFB sequences in samples from the terminal ileum of patients with ulcerative colitis and in control subjects.

conclusionsThe presence of putative SFB sequence in both patients with ulcerative colitis and control subject suggests that SFB cannot be considered as being uniquely associated with the disease. The second conclusion is that among the patients with ulcerative colitis, a tendency does exist for active disease samples to show higher SFB load, opening new perspectives about possible identification and pharmacological manipulation of SFB-mediated processes for new therapeutic strategy.

Indexed as

diagnosisleum biopsypolymerase-chain reactionsegmented filamentous bacteriaulcerative colitis

Identifiers

PMID29259792
PMCPMC5728270
OpenAlexW2774096981

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.