Evidence map›Paper›PMID 29259316›Full record

ArticleScientific reports2017

Correction of a Disease Mutation using CRISPR/Cas9-assisted Genome Editing in Japanese Black Cattle.

Mitsumi Ikeda, Shuichi Matsuyama, Satoshi Akagi, Katsuhiro Ohkoshi, Sho Nakamura, Shiori Minabe, Koji Kimura, Misa Hosoe

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.8field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 57 citations in OpenAlex.

  1. Article
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  4. Outlook on genome editing application to cattle.Journal of veterinary science · 2024
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Mitsumi IkedaInstitute of Agrobiological Sciences, NARO, Ikenodai 2, Tsukuba, Ibaraki, 305-8602, Japan.
Shuichi MatsuyamaInstitute of Livestock and Grassland Science, NARO, Senbonmatsu 768, Nasushiobara, Tochigi, 329-2793, Japan.
Satoshi AkagiInstitute of Livestock and Grassland Science, NARO, Ikenodai 2, Tsukuba, Ibaraki, 305-0901, Japan.
Katsuhiro OhkoshiInstitute of Agrobiological Sciences, NARO, Ikenodai 2, Tsukuba, Ibaraki, 305-8602, Japan.
Sho NakamuraInstitute of Livestock and Grassland Science, NARO, Senbonmatsu 768, Nasushiobara, Tochigi, 329-2793, Japan.
Shiori MinabeInstitute of Livestock and Grassland Science, NARO, Senbonmatsu 768, Nasushiobara, Tochigi, 329-2793, Japan.
Koji KimuraOkayama University Graduate School of Environmental and Life Science, Tsushima-Naka 1-1-1, Kita-ku, Okayama, 700-8530, Japan.
Misa HosoeInstitute of Agrobiological Sciences, NARO, Ikenodai 2, Tsukuba, Ibaraki, 305-8602, Japan. hosoe@affrc.go.jp.
Institute of Livestock and Grassland Science · JPInstitute of Agrobiological Sciences · JPOkayama University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Isoleucyl-tRNA synthetase (IARS) syndrome is a recessive disease of Japanese Black cattle caused by a single nucleotide substitution. To repair the mutated IARS gene, we designed clustered regularly interspaced short palindromic repeats (CRISPR)/CRISPR-associated protein 9 (Cas9) to create a double-strand break near the mutation site. CRISPR/Cas9 and donor DNA that contained a synonymous codon for the correct amino acid and an Aequorea coerulescens Green Fluorescent Protein (AcGFP) cassette with a piggyBac transposase recognition site at both ends were introduced into bovine fetal fibroblast (BFF) cells isolated from a homozygous mutant calf. Recombinant cells were enriched on the basis of expression of AcGFP, and two cell lines that contained the repaired allele were subcloned. We generated somatic cell nuclear transfer (SCNT) embryos from the repaired cells and transferred 22 blastocysts to recipient cows. In total, five viable fetuses were retrieved at Days 34 and 36. PiggyBac transposase mRNA was introduced into BFF cells isolated from cloned foetuses and AcGFP-negative cells were used for second round of cloning. We transferred nine SCNT embryos to recipient cows and retrieved two fetuses at Day 34. Fetal genomic DNA analysis showed correct repair of the IARS mutation without any additional DNA footprint.

Indexed as

AnimalsBlastocystCattleCattle DiseasesCell LineClustered Regularly Interspaced Short Palindromic RepeatsCRISPR-Cas SystemsDNAEndonucleasesGene EditingGenomeGreen Fluorescent ProteinsIsoleucine-tRNA LigaseJapanMutationNuclear Transfer TechniquesDNAEndonucleasesGreen Fluorescent ProteinsIsoleucine-tRNA LigaseRNA, MessengerTransposases

Identifiers

PMID29259316
PMCPMC5736618
OpenAlexW2774217552

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.