Evidence map›Paper›PMID 29259186›Full record

ArticleNature communications2017

Mutational patterns in chemotherapy resistant muscle-invasive bladder cancer.

David Liu, Philip Abbosh, Daniel Keliher, Brendan Reardon, Diana Miao, Kent Mouw, Amaro Weiner-Taylor, Stephanie Wankowicz, Garam Han, Min Yuen Teo and 15 more

Open access · goldAbstract readComparative Study
In one paragraph

Article in Nature communications, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 84 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
84citing papers in PubMed, 1 pooled it
12.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

84 citing papers in PubMed, 1 synthesis or guideline pooled it, 156 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Trial
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Melanoma to rhabdomyosarcoma plasticity in the setting of immunotherapy.medRxiv : the preprint server for health sciences · 2025
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Review

24 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

25 authors at 5 institutions in 1 country.

David LiuDana-Farber Cancer Institute, Boston, MA, 02215, USA.ORCID http://orcid.org/0000-0003-0346-5033
Philip AbboshFox Chase Cancer Center, Philadelphia, PA, 19111, USA.
Daniel KeliherDana-Farber Cancer Institute, Boston, MA, 02215, USA.
Brendan ReardonDana-Farber Cancer Institute, Boston, MA, 02215, USA.
Diana MiaoDana-Farber Cancer Institute, Boston, MA, 02215, USA.
Kent MouwDana-Farber Cancer Institute, Boston, MA, 02215, USA.
Amaro Weiner-TaylorBroad Institute of Harvard and MIT, Cambridge, MA, 02142, USA.
Stephanie WankowiczDana-Farber Cancer Institute, Boston, MA, 02215, USA.
Garam HanDana-Farber Cancer Institute, Boston, MA, 02215, USA.
Min Yuen TeoMemorial Sloan Kettering Cancer Center, New York, NY, 10065, USA.
Catharine CipollaMemorial Sloan Kettering Cancer Center, New York, NY, 10065, USA.
Jaegil KimBroad Institute of Harvard and MIT, Cambridge, MA, 02142, USA.
Gopa IyerMemorial Sloan Kettering Cancer Center, New York, NY, 10065, USA.ORCID http://orcid.org/0000-0002-5093-6099
Hikmat Al-AhmadieMemorial Sloan Kettering Cancer Center, New York, NY, 10065, USA.
Essel DulaimiFox Chase Cancer Center, Philadelphia, PA, 19111, USA.
David Y T ChenFox Chase Cancer Center, Philadelphia, PA, 19111, USA.
R Katherine AlpaughFox Chase Cancer Center, Philadelphia, PA, 19111, USA.
Jean Hoffman-CensitsThomas Jefferson University Hospital, Philadelphia, PA, 19107, USA.
Levi A GarrawayDana-Farber Cancer Institute, Boston, MA, 02215, USA.
Gad GetzBroad Institute of Harvard and MIT, Cambridge, MA, 02142, USA.ORCID http://orcid.org/0000-0002-0936-0753
Scott L CarterDana-Farber Cancer Institute, Boston, MA, 02215, USA.
Joaquim BellmuntDana-Farber Cancer Institute, Boston, MA, 02215, USA.
Elizabeth R PlimackFox Chase Cancer Center, Philadelphia, PA, 19111, USA. elizabeth.plimack@fccc.edu.ORCID http://orcid.org/0000-0002-7618-0744
Jonathan E RosenbergMemorial Sloan Kettering Cancer Center, New York, NY, 10065, USA. rosenbj1@mskcc.org.
Eliezer M Van AllenDana-Farber Cancer Institute, Boston, MA, 02215, USA. eliezerm_vanallen@dfci.harvard.edu.ORCID http://orcid.org/0000-0002-0201-4444
Broad Institute · USFox Chase Cancer Center · USMemorial Sloan Kettering Cancer Center · USDana-Farber Cancer Institute · USThomas Jefferson University Hospital · US

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Hongbiao Carl Lekaye · 1985 to 2026
$347.4M
WORD PROCESSING CENTER--COREP30CA006927 · NCI · RESEARCH INST OF FOX CHASE CAN CTR · PI Dietmar J Kappes · 1985 to 2026
$138.8M
Harvard Clinical and Translational Science CenterUL1TR001102 · NCATS · HARVARD MEDICAL SCHOOL · PI NADLER, LEE MARSHALL · 2013 to 2017
$106.2M
Resistance to Emerging Androgen Deprivation Therapies in Prostate CancerK08CA188615 · NCI · DANA-FARBER CANCER INST · PI VAN ALLEN, ELIEZER M · 2014 to 2017
$708k
NCATS NIH HHS UL1 TR001102NCI NIH HHS K08 CA188615NCI NIH HHS P30 CA006927NCI NIH HHS P30 CA008748
6 · The paper itself

Abstract

Despite continued widespread use, the genomic effects of cisplatin-based chemotherapy and implications for subsequent treatment are incompletely characterized. Here, we analyze whole exome sequencing of matched pre- and post-neoadjuvant cisplatin-based chemotherapy primary bladder tumor samples from 30 muscle-invasive bladder cancer patients. We observe no overall increase in tumor mutational burden post-chemotherapy, though a significant proportion of subclonal mutations are unique to the matched pre- or post-treatment tumor, suggesting chemotherapy-induced and/or spatial heterogeneity. We subsequently identify and validate a novel mutational signature in post-treatment tumors consistent with known characteristics of cisplatin damage and repair. We find that post-treatment tumor heterogeneity predicts worse overall survival, and further observe alterations in cell-cycle and immune checkpoint regulation genes in post-treatment tumors. These results provide insight into the clinical and genomic dynamics of tumor evolution with cisplatin-based chemotherapy, suggest mechanisms of clinical resistance, and inform development of clinically relevant biomarkers and trials of combination therapies.

Indexed as

AdultAgedAged, 80 and overAntineoplastic Combined Chemotherapy ProtocolsBiomarkers, TumorCarcinomaCisplatinClonal EvolutionCohort StudiesCystectomyDNA Mutational AnalysisDrug Resistance, NeoplasmExome SequencingFemaleHumansMaleBiomarkers, TumorCisplatin

Identifiers

PMID29259186
PMCPMC5736752
OpenAlexW2772360708

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.