Evidence map›Paper›PMID 29257953›Full record

ArticleDevelopmental cell2017

Evolutionary Proteomics Uncovers Ancient Associations of Cilia with Signaling Pathways.

Monika Abedin Sigg, Tabea Menchen, Chanjae Lee, Jeffery Johnson, Melissa K Jungnickel, Semil P Choksi, Galo Garcia, Henriette Busengdal, Gerard W Dougherty, Petra Pennekamp and 7 more

Open access · bronzeAbstract read
In one paragraph

Article in Developmental cell, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 68 papers.

0numbers the graph read from it
0cells of the map it votes in
68citing papers in PubMed
11.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

68 citing papers in PubMed, 133 citations in OpenAlex.

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  9. The kinesin-4 protein KIF27 forms a cytoskeletal scaffold at the transition zone to promote motile cilia structural integrity.Proceedings of the National Academy of Sciences of the United States of America · 2025
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8 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

17 authors at 6 institutions in 3 countries.

Monika Abedin SiggDepartment of Biochemistry and Biophysics, Cardiovascular Research Institute, University of California, San Francisco, CA 94158, USA.
Tabea MenchenDepartment of General Pediatrics, University Children's Hospital Muenster, Muenster 48149, Germany.
Chanjae LeeDepartment of Molecular Biosciences, Center for Systems and Synthetic Biology and Institute for Cellular and Molecular Biology, University of Texas at Austin, Austin, TX 78712, USA.
Jeffery JohnsonGladstone Institute of Cardiovascular Disease and Gladstone Institute of Virology and Immunology, San Francisco, CA 94158, USA.
Melissa K JungnickelDepartment of Cell and Developmental Biology, University of Massachusetts Medical School, Worcester, MA 01655, USA.
Semil P ChoksiDepartment of Biochemistry and Biophysics, Cardiovascular Research Institute, University of California, San Francisco, CA 94158, USA.
Galo GarciaDepartment of Biochemistry and Biophysics, Cardiovascular Research Institute, University of California, San Francisco, CA 94158, USA.
Henriette BusengdalSars International Centre for Marine Molecular Biology, University of Bergen, Bergen 5008, Norway.
Gerard W DoughertyDepartment of General Pediatrics, University Children's Hospital Muenster, Muenster 48149, Germany.
Petra PennekampDepartment of General Pediatrics, University Children's Hospital Muenster, Muenster 48149, Germany.
Claudius WernerDepartment of General Pediatrics, University Children's Hospital Muenster, Muenster 48149, Germany.
Fabian RentzschSars International Centre for Marine Molecular Biology, University of Bergen, Bergen 5008, Norway.
Harvey M FlormanDepartment of Cell and Developmental Biology, University of Massachusetts Medical School, Worcester, MA 01655, USA.
Nevan KroganGladstone Institute of Cardiovascular Disease and Gladstone Institute of Virology and Immunology, San Francisco, CA 94158, USA; Department of Cellular and Molecular Pharmacology, University of California, San Francisco, CA 94158, USA.
John B WallingfordDepartment of Molecular Biosciences, Center for Systems and Synthetic Biology and Institute for Cellular and Molecular Biology, University of Texas at Austin, Austin, TX 78712, USA.
Heymut OmranDepartment of General Pediatrics, University Children's Hospital Muenster, Muenster 48149, Germany.
Jeremy F ReiterDepartment of Biochemistry and Biophysics, Cardiovascular Research Institute, University of California, San Francisco, CA 94158, USA. Electronic address: jeremy.reiter@ucsf.edu.
University Hospital Münster · DEUniversity of California, San Francisco · USThe University of Texas at Austin · USUniversity of Bergen · NOUniversity of Massachusetts Chan Medical School · USGladstone Institutes · US

Funding

UCSF Nutrition Obesity Research CenterP30DK098722 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI CHRISTIAN VAISSE · 2015 to 2026
$14.6M
Hedgehog signaling at the cell's antenna: Smoothened and the primary ciliumR01AR054396 · NIAMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Jeremy F Reiter · 2007 to 2026
$9.0M
Obesity in Ciliopathies: How Neuronal Primary Cilia Control AppetiteR01DK106404 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI REITER, JEREMY F, VAISSE, CHRISTIAN · 2016 to 2025
$6.6M
Mapping the CPLANE interactome, an extensive protein interaction network underlying human ciliopathiesR01HD085901 · NICHD · UNIVERSITY OF TEXAS AT AUSTIN · PI EDWARD M MARCOTTE, John B Wallingford · 2016 to 2026
$6.2M
Development and function in mucociliary epitheliaR01HL117164 · NHLBI · UNIVERSITY OF TEXAS AT AUSTIN · PI John B Wallingford · 2013 to 2026
$4.7M
Transition zone control of ciliary signalingR01GM095941 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI REITER, JEREMY F · 2011 to 2018
$3.4M
Regulators of the sperm acrosome reactionR01HD046948 · NICHD · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI FLORMAN, HARVEY M · 2004 to 2014
$3.2M
NHLBI NIH HHS R01 HL117164NIAMS NIH HHS R01 AR054396NICHD NIH HHS R01 HD046948NICHD NIH HHS R01 HD085901NIDDK NIH HHS P30 DK098722NIDDK NIH HHS R01 DK106404NIGMS NIH HHS R01 GM095941
6 · The paper itself

Abstract

Cilia are organelles specialized for movement and signaling. To infer when during evolution signaling pathways became associated with cilia, we characterized the proteomes of cilia from sea urchins, sea anemones, and choanoflagellates. We identified 437 high-confidence ciliary candidate proteins conserved in mammals and discovered that Hedgehog and G-protein-coupled receptor pathways were linked to cilia before the origin of bilateria and transient receptor potential (TRP) channels before the origin of animals. We demonstrated that candidates not previously implicated in ciliary biology localized to cilia and further investigated ENKUR, a TRP channel-interacting protein identified in the cilia of all three organisms. ENKUR localizes to motile cilia and is required for patterning the left-right axis in vertebrates. Moreover, mutation of ENKUR causes situs inversus in humans. Thus, proteomic profiling of cilia from diverse eukaryotes defines a conserved ciliary proteome, reveals ancient connections to signaling, and uncovers a ciliary protein that underlies development and human disease.

Indexed as

Adaptor Proteins, Signal TransducingAnimalsCalmodulin-Binding ProteinsCell Culture TechniquesChoanoflagellataCiliaHedgehog ProteinsHumansMiceMutationOrganellesPhylogenyProteomicsReceptors, G-Protein-CoupledSea AnemonesSea UrchinsAdaptor Proteins, Signal TransducingCalmodulin-Binding ProteinsENKUR protein, humanHedgehog ProteinsReceptors, G-Protein-CoupledTransient Receptor Potential ChannelschoanoflagellateciliopathyciliumGPCRHedgehog signalingleft-right axis patterningproteomicssea anemonesea urchinTRP channel

Identifiers

PMID29257953
PMCPMC5752135
OpenAlexW2778987076

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.