Evidence map›Paper›PMID 29255295›Full record

ArticleScientific reports2017

Estimating the occurrence of primary ubiquinone deficiency by analysis of large-scale sequencing data.

Bryan G Hughes, Paul M Harrison, Siegfried Hekimi

Abstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. The efficacy of coenzyme QJournal of cellular and molecular medicine · 2022
    Pooled it
  2. Article
  3. Article
  4. Understanding coenzyme Q.Physiological reviews · 2024
    Review
  5. Article
  6. Article
  7. Article
  8. Primary Coenzyme Q10 Deficiency: An Update.Antioxidants (Basel, Switzerland) · 2023
    Review
  9. A novelMolecular genetics and metabolism reports · 2022
    Article
  10. Article
  11. Article
  12. Cellular Models for Primary CoQ Deficiency Pathogenesis Study.International journal of molecular sciences · 2021
    Review
  13. Article
  14. Article
  15. Review
  16. Article
  17. Journal of clinical medicine · 2019
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Bryan G HughesDepartment of Biology, McGill University, Montreal, Canada.
Paul M HarrisonDepartment of Biology, McGill University, Montreal, Canada.
Siegfried HekimiDepartment of Biology, McGill University, Montreal, Canada. siegfried.hekimi@mcgill.ca.

Funding

CIHR MOP-114891CIHR MOP-123295CIHR MOP-97869
6 · The paper itself

Abstract

Primary ubiquinone (UQ) deficiency is an important subset of mitochondrial disease that is caused by mutations in UQ biosynthesis genes. To guide therapeutic efforts we sought to estimate the number of individuals who are born with pathogenic variants likely to cause this disorder. We used the NCBI ClinVar database and literature reviews to identify pathogenic genetic variants that have been shown to cause primary UQ deficiency, and used the gnomAD database of full genome or exome sequences to estimate the frequency of both homozygous and compound heterozygotes within seven genetically-defined populations. We used known population sizes to estimate the number of afflicted individuals in these populations and in the mixed population of the USA. We then performed the same analysis on predicted pathogenic loss-of-function and missense variants that we identified in gnomAD. When including only known pathogenic variants, our analysis predicts 1,665 affected individuals worldwide and 192 in the USA. Adding predicted pathogenic variants, our estimate grows to 123,789 worldwide and 1,462 in the USA. This analysis predicts that there are many undiagnosed cases of primary UQ deficiency, and that a large proportion of these will be in developing regions of the world.

Indexed as

AtaxiaDatabases, Nucleic AcidExomeExome SequencingGene FrequencyHigh-Throughput Nucleotide SequencingHumansMitochondrial DiseasesMuscle WeaknessMutationPhenotypeUbiquinoneUbiquinone

Identifiers

PMID29255295
PMCPMC5735152

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.