Evidence map›Paper›PMID 29255136›Full record

ArticleMolecular & cellular proteomics : MCP2018

Specificity of Phosphorylation Responses to Mitogen Activated Protein (MAP) Kinase Pathway Inhibitors in Melanoma Cells.

Joel Basken, Scott A Stuart, Andrew J Kavran, Thomas Lee, Christopher C Ebmeier, William M Old, Natalie G Ahn

Open access · hybridAbstract read
In one paragraph

Article in Molecular & cellular proteomics : MCP, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 35 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
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  6. Article
  7. Review
  8. Dynamic equilibria in protein kinases.Current opinion in structural biology · 2021
    Review
  9. Article
  10. Article
  11. Article
  12. Identification of the Host Substratome ofFrontiers in cell and developmental biology · 2021
    Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Activation loop dynamics are controlled by conformation-selective inhibitors of ERK2.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  19. Functional divergence caused by mutations in an energetic hotspot in ERK2.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 3 countries.

Joel BaskenFrom the ‡Department of Chemistry and Biochemistry.ORCID 0000-0003-3205-177X
Scott A StuartFrom the ‡Department of Chemistry and Biochemistry.
Andrew J KavranFrom the ‡Department of Chemistry and Biochemistry.
Thomas LeeFrom the ‡Department of Chemistry and Biochemistry.
Christopher C Ebmeier¶Department of Molecular, Cellular, Developmental Biology, University of Colorado, Boulder, CO 80303.
William M Old¶Department of Molecular, Cellular, Developmental Biology, University of Colorado, Boulder, CO 80303.
Natalie G AhnFrom the ‡Department of Chemistry and Biochemistry, natalie.ahn@colorado.edu.ORCID 0000-0002-2690-2630
University of Colorado Boulder · US

Funding

MOLECULAR BIOLOGYT32GM007135 · NIGMS · UNIVERSITY OF COLORADO AT BOULDER · PI KRAUTER, KENNETH S · 1985 to 2012
$5.7M
Linking Dynamics to Catalysis and Inhibition in ERK2R01GM114594 · NIGMS · UNIVERSITY OF COLORADO · PI AHN, NATALIE G. · 2016 to 2019
$1.3M
NIGMS NIH HHS R01 GM114594NIGMS NIH HHS T32 GM007135
6 · The paper itself

Abstract

The BRAF-MKK1/2-ERK1/2 pathway is constitutively activated in response to oncogenic mutations of BRAF in many cancer types, including melanoma. Although small molecules that inhibit oncogenic BRAF and MAP kinase kinase (MKK)1/2 have been successful in clinical settings, resistance invariably develops. High affinity inhibitors of ERK1/2 have been shown in preclinical studies to bypass the resistance of melanoma and colon cancer cells to BRAF and MKK1/2 inhibitors, and are thus promising additions to current treatment protocols. But still unknown is how molecular responses to ERK1/2 inhibitors compare with inhibitors currently in clinical use. Here, we employ quantitative phosphoproteomics to evaluate changes in phosphorylation in response to the ERK inhibitors, SCH772984 and GDC0994, and compare these to the clinically used MKK1/2 inhibitor, trametinib. Combined with previous studies measuring phosphoproteomic responses to the MKK1/2 inhibitor, selumetinib, and the BRAF inhibitor, vemurafenib, the outcomes reveal key insights into pathway organization, phosphorylation specificity and off-target effects of these inhibitors. The results demonstrate linearity in signaling from BRAF to MKK1/2 and from MKK1/2 to ERK1/2. They identify likely targets of direct phosphorylation by ERK1/2, as well as inhibitor off-targets, including an off-target regulation of the p38α mitogen activated protein kinase (MAPK) pathway by the MKK1/2 inhibitor, trametinib, at concentrations used in the literature but higher than

Indexed as

Cell Line, TumorHumansIndazolesMelanomaMitogen-Activated Protein KinasesPhosphorylationPiperazinesProtein Kinase InhibitorsPyridonesPyrimidinonesSignal TransductionIndazolesMitogen-Activated Protein KinasesPiperazinesProtein Kinase InhibitorsPyridonesPyrimidinonesSCH772984trametinib

Identifiers

PMID29255136
PMCPMC5880111
OpenAlexW2794968531

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.