Evidence map›Paper›PMID 29254825›Full record

ReviewMolecular and cellular neurosciences2018

The histone demethylase Kdm6b regulates a mature gene expression program in differentiating cerebellar granule neurons.

Ranjula Wijayatunge, Fang Liu, Karl B Shpargel, Nicole J Wayne, Urann Chan, Jane-Valeriane Boua, Terry Magnuson, Anne E West

Open access · greenAbstract readReview
In one paragraph

Review in Molecular and cellular neurosciences, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
1.0field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 47 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Roles of Kdm6a and Kdm6b in Regulation of Mammalian Neural Regeneration.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025
    Article
  5. Histone bivalency in CNS development.Genes & development · 2025
    Review
  6. Article
  7. An EED/PRC2-H19 Loop Regulates Cerebellar Development.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Epigenetic control and manipulation of neuronal maturation timing.Current opinion in genetics & development · 2024
    Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Ranjula WijayatungeDept. of Neurobiology, Duke University Medical Center, Durham, NC 27710, United States.
Fang LiuDept. of Neurobiology, Duke University Medical Center, Durham, NC 27710, United States.
Karl B ShpargelDept. of Genetics and Lineberger Comprehensive Cancer Center, University of North Carolina, Chapel Hill, NC 27599, United States.
Nicole J WayneDept. of Neurobiology, Duke University Medical Center, Durham, NC 27710, United States.
Urann ChanDept. of Neurobiology, Duke University Medical Center, Durham, NC 27710, United States.
Jane-Valeriane BouaDept. of Neurobiology, Duke University Medical Center, Durham, NC 27710, United States.
Terry MagnusonDept. of Genetics and Lineberger Comprehensive Cancer Center, University of North Carolina, Chapel Hill, NC 27599, United States.
Anne E WestDept. of Neurobiology, Duke University Medical Center, Durham, NC 27710, United States. Electronic address: west@neuro.duke.edu.
Duke University Hospital · USUNC Lineberger Comprehensive Cancer CenterDuke Medical Center · USDuke University · US

Funding

Albino Deletion Complex and Early Mouse DevelopmentR01GM101974 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI MAGNUSON, TERRY R · 2012 to 2024
$5.2M
Chromatin Mechanisms of Neuronal MaturationR01NS098804 · NINDS · DUKE UNIVERSITY · PI WEST, ANNE ELIZABETH · 2017 to 2021
$2.2M
Epigenetic Regulation of Transcriptional Repression by Drugs of AbuseR01DA022202 · NIDA · DUKE UNIVERSITY · PI WEST, ANNE ELIZABETH · 2006 to 2010
$1.7M
Genome-Wide Mapping of Enhancer Elements for Neuronal Differentiation GenesR21NS084336 · NINDS · DUKE UNIVERSITY · PI CRAWFORD, GREGORY E, WEST, ANNE ELIZABETH · 2013 to 2014
$422k
NIDA NIH HHS R01 DA022202NIGMS NIH HHS R01 GM101974NINDS NIH HHS R01 NS098804NINDS NIH HHS R21 NS084336
6 · The paper itself

Abstract

The histone H3 lysine 27 (H3K27) demethylase Kdm6b (Jmjd3) can promote cellular differentiation, however its physiological functions in neurons remain to be fully determined. We studied the expression and function of Kdm6b in differentiating granule neurons of the developing postnatal mouse cerebellum. At postnatal day 7, Kdm6b is expressed throughout the layers of the developing cerebellar cortex, but its expression is upregulated in newborn cerebellar granule neurons (CGNs). Atoh1-Cre mediated conditional knockout of Kdm6b in CGN precursors either alone or in combination with Kdm6a did not disturb the gross morphological development of the cerebellum. Furthermore, RNAi-mediated knockdown of Kdm6b in cultured CGN precursors did not alter the induced expression of early neuronal marker genes upon cell cycle exit. By contrast, knockdown of Kdm6b significantly impaired the induction of a mature neuronal gene expression program, which includes gene products required for functional synapse maturation. Loss of Kdm6b also impaired the ability of Brain-Derived Neurotrophic Factor (BDNF) to induce expression of Grin2c and Tiam1 in maturing CGNs. Taken together, these data reveal a previously unknown role for Kdm6b in the postmitotic stages of CGN maturation and suggest that Kdm6b may work, at least in part, by a transcriptional mechanism that promotes gene sensitivity to regulation by BDNF.

Indexed as

AnimalsCytoplasmic GranulesGene ExpressionHistone DemethylasesHistonesHumansJumonji Domain-Containing Histone DemethylasesNeuronsHistone DemethylasesHistonesJumonji Domain-Containing Histone DemethylasesKDM6B protein, humanBDNFCerebellumHistone DemethylaseKdm6bNeuronal differentiation

Identifiers

PMID29254825
PMCPMC5828961
OpenAlexW2772946590

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.