Evidence map›Paper›PMID 29254333›Full record

ArticleACS chemical neuroscience2018

Large Scale Identification of Variant Proteins in Glioma Stem Cells.

Ekaterina Mostovenko, Ákos Végvári, Melinda Rezeli, Cheryl F Lichti, David Fenyö, Qianghu Wang, Frederick F Lang, Erik P Sulman, K Barbara Sahlin, György Marko-Varga and 1 more

Open access · greenAbstract read
In one paragraph

Article in ACS chemical neuroscience, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.7field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 13 citations in OpenAlex.

  1. The translatome of glioblastoma.Molecular oncology · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Ekaterina MostovenkoDepartment of Anatomy and Neurobiology, Virginia Commonwealth University School of Medicine , 1217 E. Marshall St., Richmond, Virginia 23284, United States.
Ákos VégváriClinical Protein Science & Imaging, Biomedical Center, Department of Biomedical Engineering, Lund University , SE-221 84 Lund, Sweden.
Melinda RezeliClinical Protein Science & Imaging, Biomedical Center, Department of Biomedical Engineering, Lund University , SE-221 84 Lund, Sweden.ORCID 0000-0003-4373-5616
Cheryl F LichtiDepartment of Anatomy and Neurobiology, Virginia Commonwealth University School of Medicine , 1217 E. Marshall St., Richmond, Virginia 23284, United States.
David FenyöDepartment of Biochemistry and Molecular Pharmacology and Institute for Systems Genetics, New York University School of Medicine , New York, New York 10016, United States.
Qianghu Wang
Frederick F Lang
Erik P Sulman
K Barbara SahlinClinical Protein Science & Imaging, Biomedical Center, Department of Biomedical Engineering, Lund University , SE-221 84 Lund, Sweden.
György Marko-VargaClinical Protein Science & Imaging, Biomedical Center, Department of Biomedical Engineering, Lund University , SE-221 84 Lund, Sweden.
Carol L NilssonCenter of Excellence in Biological and Medical Mass Spectrometry, Lund University , Klinikgatan 32, SE-221 84 Lund, Sweden.ORCID 0000-0002-2838-8751
Lund University · SEVirginia Commonwealth University · USNew York University · US

Funding

Tropism Enhanced Oncolytic Adenovirus for the Treatment of Brain TumorsP50CA127001 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI Juan Fueyo · 2008 to 2026
$41.2M
Proteogenomic Data Analysis for Cancer Systems Biology and Clinical TranslationU24CA210972 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI DING, LI, FENYO, DAVID · 2016 to 2020
$3.3M
NCI NIH HHS P50 CA127001NCI NIH HHS U24 CA210972
6 · The paper itself

Abstract

Glioblastoma (GBM), the most malignant of primary brain tumors, is a devastating and deadly disease, with a median survival of 14 months from diagnosis, despite standard regimens of radical brain tumor surgery, maximal safe radiation, and concomitant chemotherapy. GBM tumors nearly always re-emerge after initial treatment and frequently display resistance to current treatments. One theory that may explain GBM re-emergence is the existence of glioma stemlike cells (GSCs). We sought to identify variant protein features expressed in low passage GSCs derived from patient tumors. To this end, we developed a proteomic database that reflected variant and nonvariant sequences in the human proteome, and applied a novel retrograde proteomic workflow, to identify and validate the expression of 126 protein variants in 33 glioma stem cell strains. These newly identified proteins may harbor a subset of novel protein targets for future development of GBM therapy.

Indexed as

ProteomeBrain NeoplasmsCells, CulturedGliomaHumansNeoplastic Stem CellsProteomicsProteomebioinformaticsGBMGlioblastomaparallel reaction monitoringprecision medicineprotein quantificationprotein single amino acid variantsproteomicstargeted mass spectrometrytranscriptomics

Identifiers

PMID29254333
PMCPMC6008157
OpenAlexW2781368338

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.