Evidence map›Paper›PMID 29253894›Full record

ArticlePLoS genetics2017

Background sequence characteristics influence the occurrence and severity of disease-causing mtDNA mutations.

Wei Wei, Aurora Gomez-Duran, Gavin Hudson, Patrick F Chinnery

Erratum issuedAbstract read
In one paragraph

Article in PLoS genetics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed.

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  12. Precision mitochondrial medicine.Cambridge prisms. Precision medicine · 2023
    Review
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors.

Wei WeiMRC-Mitochondrial Biology Unit, Cambridge Biomedical Campus, Cambridge, United Kingdom.
Aurora Gomez-DuranMRC-Mitochondrial Biology Unit, Cambridge Biomedical Campus, Cambridge, United Kingdom.ORCID 0000-0002-5895-6860
Gavin HudsonInstitute of Genetic Medicine, Central Parkway, Newcastle University, Newcastle upon Tyne, United Kingdom.
Patrick F ChinneryMRC-Mitochondrial Biology Unit, Cambridge Biomedical Campus, Cambridge, United Kingdom.ORCID 0000-0002-7065-6617

Funding

Medical Research Council MC_UP_1501/2Wellcome Trust
6 · The paper itself

Abstract

Inherited mitochondrial DNA (mtDNA) mutations have emerged as a common cause of human disease, with mutations occurring multiple times in the world population. The clinical presentation of three pathogenic mtDNA mutations is strongly associated with a background mtDNA haplogroup, but it is not clear whether this is limited to a handful of examples or is a more general phenomenon. To address this, we determined the characteristics of 30,506 mtDNA sequences sampled globally. After performing several quality control steps, we ascribed an established pathogenicity score to the major alleles for each sequence. The mean pathogenicity score for known disease-causing mutations was significantly different between mtDNA macro-haplogroups. Several mutations were observed across all haplogroup backgrounds, whereas others were only observed on specific clades. In some instances this reflected a founder effect, but in others, the mutation recurred but only within the same phylogenetic cluster. Sequence diversity estimates showed that disease-causing mutations were more frequent on young sequences, and genomes with two or more disease-causing mutations were more common than expected by chance. These findings implicate the mtDNA background more generally in recurrent mutation events that have been purified through natural selection in older populations. This provides an explanation for the low frequency of mtDNA disease reported in specific ethnic groups.

Indexed as

MutationAllelesBase SequenceDatabases, GeneticDNA, MitochondrialFounder EffectGene FrequencyGenetic VariationHaplotypesHumansMitochondriaOptic Atrophy, Hereditary, LeberPhylogenyDNA, Mitochondrial

Identifiers

PMID29253894
PMCPMC5757940

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.