Evidence map›Paper›PMID 29251729›Full record

ArticleNature biotechnology2018

Virus stamping for targeted single-cell infection in vitro and in vivo.

Rajib Schubert, Stuart Trenholm, Kamill Balint, Georg Kosche, Cameron S Cowan, Manuel A Mohr, Martin Munz, David Martinez-Martin, Gotthold Fläschner, Richard Newton and 10 more

Abstract read
PubMed Publisher
In one paragraph

Article in Nature biotechnology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
6.2field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 45 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Advances in optical molecular imaging for neural visualization.Frontiers in bioengineering and biotechnology · 2023
    Review
  5. Article
  6. Review
  7. Article
  8. Red Light Optogenetics in Neuroscience.Frontiers in cellular neuroscience · 2021
    Review
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Review
  15. Article
  16. Review
  17. Article
  18. Genetic Modification of Brain Organoids.Frontiers in cellular neuroscience · 2019
    Article
  19. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

20 authors at 4 institutions in 2 countries.

Rajib SchubertDepartment of Biosystems Science and Engineering, ETH Zurich, Basel, Switzerland.ORCID 0000-0002-7071-0134
Stuart TrenholmNeural Circuit Laboratories, Friedrich Miescher Institute for Biomedical Research, Basel, Switzerland.
Kamill BalintNeural Circuit Laboratories, Friedrich Miescher Institute for Biomedical Research, Basel, Switzerland.
Georg KoscheNeural Circuit Laboratories, Friedrich Miescher Institute for Biomedical Research, Basel, Switzerland.
Cameron S CowanNeural Circuit Laboratories, Friedrich Miescher Institute for Biomedical Research, Basel, Switzerland.
Manuel A MohrDepartment of Biosystems Science and Engineering, ETH Zurich, Basel, Switzerland.ORCID 0000-0002-5189-541X
Martin MunzNeural Circuit Laboratories, Friedrich Miescher Institute for Biomedical Research, Basel, Switzerland.
David Martinez-MartinDepartment of Biosystems Science and Engineering, ETH Zurich, Basel, Switzerland.
Gotthold FläschnerDepartment of Biosystems Science and Engineering, ETH Zurich, Basel, Switzerland.ORCID 0000-0001-6707-6905
Richard NewtonDepartment of Biosystems Science and Engineering, ETH Zurich, Basel, Switzerland.
Jacek KrolNeural Circuit Laboratories, Friedrich Miescher Institute for Biomedical Research, Basel, Switzerland.
Brigitte Gross ScherfNeural Circuit Laboratories, Friedrich Miescher Institute for Biomedical Research, Basel, Switzerland.
Keisuke YoneharaNeural Circuit Laboratories, Friedrich Miescher Institute for Biomedical Research, Basel, Switzerland.
Adrian WertzNeural Circuit Laboratories, Friedrich Miescher Institute for Biomedical Research, Basel, Switzerland.
Aaron PontiDepartment of Biosystems Science and Engineering, ETH Zurich, Basel, Switzerland.
Alexander GhanemMax von Pettenkofer-Institute & Gene Center, Faculty of Medicine, Ludwig-Maximilians-University Munich, Munich, Germany.
Daniel HillierNeural Circuit Laboratories, Friedrich Miescher Institute for Biomedical Research, Basel, Switzerland.
Karl-Klaus ConzelmannMax von Pettenkofer-Institute & Gene Center, Faculty of Medicine, Ludwig-Maximilians-University Munich, Munich, Germany.ORCID 0000-0002-8614-3656
Daniel J MüllerDepartment of Biosystems Science and Engineering, ETH Zurich, Basel, Switzerland.ORCID 0000-0003-3075-0665
Botond RoskaNeural Circuit Laboratories, Friedrich Miescher Institute for Biomedical Research, Basel, Switzerland.ORCID 0000-0002-9559-1450
Friedrich Miescher Institute · CHETH Zurich · CHLudwig-Maximilians-Universität München · DEUniversity of Basel · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Genetic engineering by viral infection of single cells is useful to study complex systems such as the brain. However, available methods for infecting single cells have drawbacks that limit their applications. Here we describe 'virus stamping', in which viruses are reversibly bound to a delivery vehicle-a functionalized glass pipette tip or magnetic nanoparticles in a pipette-that is brought into physical contact with the target cell on a surface or in tissue, using mechanical or magnetic forces. Different single cells in the same tissue can be infected with different viruses and an individual cell can be simultaneously infected with different viruses. We use rabies, lenti, herpes simplex, and adeno-associated viruses to drive expression of fluorescent markers or a calcium indicator in target cells in cell culture, mouse retina, human brain organoid, and the brains of live mice. Virus stamping provides a versatile solution for targeted single-cell infection of diverse cell types, both in vitro and in vivo.

Indexed as

AnimalsBrainGenetic EngineeringHumansMagnetite NanoparticlesMiceOrganoidsRetinaSingle-Cell AnalysisTissue DistributionVirus DiseasesVirusesVirus ReplicationMagnetite Nanoparticles

Identifiers

PMID29251729
OpenAlexW2776781596

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.