Evidence map›Paper›PMID 29248950›Full record

ArticleWorld journal of urology2018

A single mitochondrial DNA deletion accurately detects significant prostate cancer in men in the PSA 'grey zone'.

Jennifer Creed, Laurence Klotz, Andrew Harbottle, Andrea Maggrah, Brian Reguly, Anne George, Vincent Gnanapragasm

Open access · hybridAbstract read
In one paragraph

Article in World journal of urology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.4field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 13 citations in OpenAlex.

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  7. Mitochondrial functions and melatonin: a tour of the reproductive cancers.Cellular and molecular life sciences : CMLS · 2019
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Jennifer CreedMDNA Life Sciences UK Ltd, Newcastle upon Tyne, UK. j.creed@mdnalifesciences.com.
Laurence KlotzDivision of Urology, Sunnybrook Health Sciences Centre, University of Toronto, Toronto, Canada.
Andrew HarbottleMDNA Life Sciences UK Ltd, Newcastle upon Tyne, UK.
Andrea MaggrahMDNA Life Sciences UK Ltd, Newcastle upon Tyne, UK.
Brian RegulyMDNA Life Sciences Inc, 2054 Vista Parkway, Suite 400, West Palm Beach, FL, 33411, USA.
Anne GeorgeCambridge Urology Translational Research and Clinical Trials, Cambridge Biomedical Campus, Cambridge, UK.
Vincent GnanapragasmAcademic Urology Group, Department of Surgery and Oncology, University of Cambridge, Cambridge, UK.
Health Sciences Centre · CAUniversity of Cambridge · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposeTo determine the clinical performance of a blood-based test for clinically significant (CS) prostate cancer (PCa) (grade group ≥ 2) intended for use in men with prostate serum antigen levels in the 'grey zone' (PSA < 10 ng/ml). The test quantifies a previously described 3.4 kb mitochondrial DNA (mtDNA) deletion.

methodsIn a first prospective study of an MRI-guided re-biopsy population (n = 126), the 3.4 kb deletion and 18S rRNA gene were amplified from plasma. A diagnostic threshold was selected from the coordinates of the receiver operating characteristic curve and tested in a second population of men who were (n = 92) biopsy naïve when the mtDNA deletion was assayed and for whom those diagnosed with cancer on initial biopsy were treated with radical prostatectomy.

resultsThe 3.4 kb deletion was a good predictor of CS PCa in the image-guided re-biopsy population [AUC 0.84, (95% CI 0.73-0.95)] and the selected threshold corresponded to a sensitivity of 87% [95% CI, 70-96%], specificity of 68% [95% CI, 47-85%] and negative predictive value (NPV) of 97%. Applying this threshold to the second population showed this deletion to be a strong predictor of CS cancer [AUC 0.98, (95% CI 0.94-1.02)], independent of PSA or age [sensitivity 100% (95% CI, 93-100%), specificity 90% (95%CI 73-98%) and NPV 100%].

conclusionThe 3.4 kb deletion in plasma is an accurate predictor of CS cancer for men in the PSA 'grey zone'. Used in advance of biopsy for improved patient selection, this deletion may reduce the number of biopsies needed to diagnose CS prostate cancers.

Indexed as

AgedBase SequenceBiopsyDNA, MitochondrialHumansImage-Guided BiopsyKallikreinsMaleMiddle AgedProstateProstatectomyProstate-Specific AntigenProstatic NeoplasmsRNA, Ribosomal, 18SROC CurveSensitivity and SpecificityDNA, MitochondrialKallikreinsKLK3 protein, humanProstate-Specific AntigenRNA, Ribosomal, 18SBiomarkerDiagnostic accuracyDNA deletionMitochondrial DNAMulti-parametric magnetic resonance imagingPlasmaProstate cancerReal-time PCR

Identifiers

PMID29248950
PMCPMC5846823
OpenAlexW2773281111

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.