Evidence map›Paper›PMID 29247569›Full record

ArticleProtein science : a publication of the Protein Society2018

Penetration into membrane of amino-terminal region of SecA when associated with SecYEG in active complexes.

Bahar T Findik, Virginia F Smith, Linda L Randall

Open access · bronzeAbstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.8field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 26 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Review
  5. Article
  6. Article
  7. Binding of SecA ATPase monomers and dimers to lipid vesicles.Biochimica et biophysica acta. Biomembranes · 2020
    Article
  8. Article
  9. Review
  10. Article
  11. Direct visualization of theScience advances · 2019
    Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Bahar T FindikDepartment of Biochemistry, 117 Schweitzer Hall, University of Missouri, Columbia, Missouri, 65211.
Virginia F SmithChemistry Department, U.S. Naval Academy, Annapolis, Maryland, 21402.
Linda L RandallDepartment of Biochemistry, 117 Schweitzer Hall, University of Missouri, Columbia, Missouri, 65211.
University of Missouri · USUnited States Naval Academy · US

Funding

The Export of Proteins in Escherichia Coli; Administrative Supplement for EquipmentR01GM029798 · NIGMS · WASHINGTON STATE UNIVERSITY · PI RANDALL, LINDA L. · 1985 to 2019
$7.7M
EXPORT OF PROTEINS IN ESCHERICHIA COLIR37GM029798 · NIGMS · WASHINGTON STATE UNIVERSITY · PI RANDALL, LINDA L. · 1993 to 2002
$1.1M
NIGMS NIH HHS R01 GM029798NIGMS NIH HHS R37 GM029798
6 · The paper itself

Abstract

The general secretory (Sec) system of Escherichia coli translocates both periplasmic and outer membrane proteins through the cytoplasmic membrane. The pathway through the membrane is provided by a highly conserved translocon, which in E. coli comprises two heterotrimeric integral membrane complexes, SecY, SecE, and SecG (SecYEG), and SecD, SecF, and YajC (SecDF/YajC). SecA is an associated ATPase that is essential to the function of the Sec system. SecA plays two roles, it targets precursors to the translocon with the help of SecB and it provides energy via hydrolysis of ATP. SecA exists both free in the cytoplasm and integrally membrane associated. Here we describe details of association of the amino-terminal region of SecA with membrane. We use site-directed spin labelling and electron paramagnetic resonance spectroscopy to show that when SecA is co-assembled into lipids with SecYEG to yield highly active translocons, the N-terminal region of SecA penetrates the membrane and lies at the interface between the polar and the hydrophobic regions, parallel to the plane of the membrane at a depth of approximately 5 Å. When SecA is bound to SecYEG, preassembled into proteoliposomes, or nonspecifically bound to lipids in the absence of SecYEG, the N-terminal region penetrates more deeply (8 Å). Implications of partitioning of the SecA N-terminal region into lipids on the complex between SecB carrying a precursor and SecA are discussed.

Indexed as

Adenosine TriphosphatasesAdenosine TriphosphateBacterial ProteinsCell MembraneCytoplasmEscherichia coliEscherichia coli ProteinsHydrolysisProtein DomainsProteolipidsSecA ProteinsSEC Translocation ChannelsAdenosine TriphosphatasesAdenosine TriphosphateBacterial ProteinsEscherichia coli ProteinsProteolipidsproteoliposomesSecA ProteinsSEC Translocation Channelsdepth in bilayerEPRpower saturationprotein exportprotein-lipid interactionsSecASecYEG proteoliposomes

Identifiers

PMID29247569
PMCPMC5818754
OpenAlexW2772707998

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.