Evidence map›Paper›PMID 29246112›Full record

ArticleBMC microbiology2017

Isolation and characterization of HepP: a virulence-related Pseudomonas aeruginosa heparinase.

Nyaradzo Dzvova, Jane A Colmer-Hamood, John A Griswold, Abdul N Hamood

Abstract read
In one paragraph

Article in BMC microbiology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
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  3. International journal of molecular sciences · 2021
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4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Nyaradzo DzvovaDepartment of Immunology and Molecular Microbiology, Texas Tech University Health Sciences Center, 3601 4th St. Mail Stop 6591, Lubbock, TX, 79430, USA.
Jane A Colmer-HamoodDepartment of Immunology and Molecular Microbiology, Texas Tech University Health Sciences Center, 3601 4th St. Mail Stop 6591, Lubbock, TX, 79430, USA.
John A GriswoldDepartment of Surgery, Texas Tech University Health Sciences Center, Lubbock, TX, USA.
Abdul N HamoodDepartment of Immunology and Molecular Microbiology, Texas Tech University Health Sciences Center, 3601 4th St. Mail Stop 6591, Lubbock, TX, 79430, USA. abdul.hamood@ttuhsc.edu.ORCID http://orcid.org/0000-0001-7193-7827

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundPseudomonas aeruginosa is an opportunistic pathogen that causes serious infections in immunocompromised hosts including severely burned patients. In burn patients, P. aeruginosa infection often leads to septic shock and death. Despite numerous studies, the influence of severe thermal injuries on the pathogenesis of P. aeruginosa during systemic infection is not known. Through RNA-seq analysis, we recently showed that the growth of P. aeruginosa strain UCBPP-PA14 (PA14) in whole blood obtained from severely burned patients significantly altered the expression of the PA14 transcriptome when compared with its growth in blood from healthy volunteers. The expression of PA14_23430 and the adjacent gene, PA14_23420, was enhanced by seven- to eightfold under these conditions.

resultsQuantitative real-time PCR analysis confirmed the enhancement of expression of both PA14_23420 and PA14_23430 by growth of PA14 in blood from severely burned patients. Computer analysis revealed that PA14_23430 (hepP) encodes a potential heparinase while PA14_23420 (zbdP) codes for a putative zinc-binding dehydrogenase. This analysis further suggested that the two genes form an operon with zbdP first. Presence of the operon was confirmed by RT-PCR experiments. We characterized hepP and its protein product HepP. hepP was cloned from PA14 by PCR and overexpressed in E. coli. The recombinant protein (rHepP) was purified using nickel column chromatography. Heparinase assays using commercially available heparinase as a positive control, revealed that rHepP exhibits heparinase activity. Mutation of hepP resulted in delay of pellicle formation at the air-liquid interface by PA14 under static growth conditions. Biofilm formation by PA14ΔhepP was also significantly reduced. In the Caenorhabditis elegans model of slow killing, mutation of hepP resulted in a significantly lower rate of killing than that of the parent strain PA14.

conclusionsChanges within the blood of severely burned patients significantly induced expression of hepP in PA14. The heparinase encoded by hepP is a potential virulence factor for PA14 as HepP influences pellicle formation as well as biofilm development by PA14 and the protein is required for full virulence in the C. elegans model of slow killing.

Indexed as

Gene Expression Regulation, EnzymologicAnimalsBacterial ProteinsBiofilmsBurnsCaenorhabditis elegansEscherichia coliGene Expression ProfilingHeparin LyaseHumansImmunocompromised HostMutationOperonPseudomonas aeruginosaPseudomonas InfectionsRecombinant ProteinsBacterial ProteinsHeparin LyaseRecombinant ProteinsVirulence FactorsBiofilmC. elegans killing modelHeparinasePelliclePseudomonas aeruginosaVirulence

Identifiers

PMID29246112
PMCPMC5732420

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.