Evidence map›Paper›PMID 29245059›Full record

ArticleNeurobiology of aging2018

Proteomic analysis of six- and twelve-month hippocampus and cerebellum in a murine Down syndrome model.

Guido N Vacano, David S Gibson, Abdullah Arif Turjoman, Jeremy W Gawryluk, Jonathan D Geiger, Mark Duncan, David Patterson

Abstract read
In one paragraph

Article in Neurobiology of aging, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Guido N VacanoKnoebel Institute for Healthy Aging, Eleanor Roosevelt Institute, and Department of Biological Sciences, University of Denver, Denver, CO, USA.
David S GibsonDivision of Endocrinology, Metabolism and Diabetes, University of Colorado Denver School of Medicine, Anschutz Medical Campus, Aurora, CO, USA.
Abdullah Arif TurjomanDivision of Endocrinology, Metabolism and Diabetes, University of Colorado Denver School of Medicine, Anschutz Medical Campus, Aurora, CO, USA.
Jeremy W GawrylukDepartment of Biomedical Sciences, School of Medicine and Health Sciences, University of North Dakota, Grand Forks, ND, USA.
Jonathan D GeigerDepartment of Biomedical Sciences, School of Medicine and Health Sciences, University of North Dakota, Grand Forks, ND, USA.
Mark DuncanDivision of Endocrinology, Metabolism and Diabetes, University of Colorado Denver School of Medicine, Anschutz Medical Campus, Aurora, CO, USA.
David PattersonKnoebel Institute for Healthy Aging, Eleanor Roosevelt Institute, and Department of Biological Sciences, University of Denver, Denver, CO, USA. Electronic address: David.Patterson@du.edu.

Funding

Pilot Projects CoreP30GM103329 · NIGMS · UNIVERSITY OF NORTH DAKOTA · PI GEIGER, JONATHAN DAVID · 2012 to 2016
$5.1M
The role of novel endolysosome-dependent calcium regulatory mechanisms in HIV-1 TR01MH100972 · NIMH · UNIVERSITY OF NORTH DAKOTA · PI CHEN, XUESONG, GEIGER, JONATHAN DAVID · 2014 to 2018
$1.6M
Role of novel endolysosome-dependent calcium regulatory mechanisms in HANDR01MH105329 · NIMH · UNIVERSITY OF NORTH DAKOTA · PI CHEN, XUESONG, GEIGER, JONATHAN DAVID · 2015 to 2019
$1.5M
Proteomics for Testing Hypotheses about Down SyndromeR01NS051539 · NINDS · UNIVERSITY OF DENVER (COLORADO SEMINARY) · PI PATTERSON, DAVID · 2004 to 2007
$1.1M
NIGMS NIH HHS P30 GM103329NIMH NIH HHS R01 MH100972NIMH NIH HHS R01 MH105329NINDS NIH HHS R01 NS051539
6 · The paper itself

Abstract

This study was designed to investigate the brain proteome of the Ts65Dn mouse model of Down syndrome. We profiled the cerebellum and hippocampus proteomes of 6- and 12-month-old trisomic and disomic mice by difference gel electrophoresis. We quantified levels of 2082 protein spots and identified 272 (170 unique UniProt accessions) by mass spectrometry. Four identified proteins are encoded by genes trisomic in the Ts65Dn mouse. Three of these (CRYZL11, EZR, and SOD1) were elevated with p-value <0.05, and 2 proteins encoded by disomic genes (MAPRE3 and PHB) were reduced. Intergel comparisons based on age (6 vs. 12 months) and brain region (cerebellum vs. hippocampus) revealed numerous differences. Specifically, 132 identified proteins were different between age groups, and 141 identified proteins were different between the 2 brain regions. Our results suggest that compensatory mechanisms exist, which ameliorate the effect of trisomy in the Ts65Dn mice. Differences observed during aging may play a role in the accelerated deterioration of learning and memory seen in Ts65Dn mice.

Indexed as

ProteomicsAgingAnimalsCerebellumDisease Models, AnimalDown SyndromeFemaleHippocampusLearningMaleMemoryMice, Inbred StrainsProteomeProteomeAgingAlzheimer's diseaseBrainDown syndromeProteomeTs65Dn

Identifiers

PMID29245059
PMCPMC5801041

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.