Evidence map›Paper›PMID 29244017›Full record

ReviewThe Journal of general virology2018

Implications of segment mismatch for influenza A virus evolution.

Maria C White, Anice C Lowen

Open access · greenAbstract readReview
In one paragraph

Review in The Journal of general virology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 64 papers.

0numbers the graph read from it
0cells of the map it votes in
64citing papers in PubMed
4.8field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

64 citing papers in PubMed, 95 citations in OpenAlex.

  1. Review
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  13. Reverse Genetics of Bat Influenza A Viruses.Methods in molecular biology (Clifton, N.J.) · 2024
    Article
  14. Review
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  19. Review
  20. High-throughput droplet-based analysis of influenza A virus genetic reassortment by single-virus RNA sequencing.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article

4 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Maria C WhiteDepartment of Microbiology and Immunology, Emory University School of Medicine, Atlanta, GA, USA.
Anice C LowenDepartment of Microbiology and Immunology, Emory University School of Medicine, Atlanta, GA, USA.
Emory University · US

Funding

Impact of selective genome packaging on influenza A virus reassortmentR01AI125268 · NIAID · EMORY UNIVERSITY · PI LOWEN, ANICE C · 2016 to 2019
$1.9M
Reassortment of influenza viruses in a co-infected hostR01AI099000 · NIAID · EMORY UNIVERSITY · PI LOWEN, ANICE C · 2012 to 2016
$1.9M
NIAID NIH HHS HHSN272201400004CNIAID NIH HHS R01 AI099000NIAID NIH HHS R01 AI125268
6 · The paper itself

Abstract

Influenza A virus (IAV) is an RNA virus with a segmented genome. These viral properties allow for the rapid evolution of IAV under selective pressure, due to mutation occurring from error-prone replication and the exchange of gene segments within a co-infected cell, termed reassortment. Both mutation and reassortment give rise to genetic diversity, but constraints shape their impact on viral evolution: just as most mutations are deleterious, most reassortment events result in genetic incompatibilities. The phenomenon of segment mismatch encompasses both RNA- and protein-based incompatibilities between co-infecting viruses and results in the production of progeny viruses with fitness defects. Segment mismatch is an important determining factor of the outcomes of mixed IAV infections and has been addressed in multiple risk assessment studies undertaken to date. However, due to the complexity of genetic interactions among the eight viral gene segments, our understanding of segment mismatch and its underlying mechanisms remain incomplete. Here, we summarize current knowledge regarding segment mismatch and discuss the implications of this phenomenon for IAV reassortment and diversity.

Indexed as

Evolution, MolecularGenome, ViralAnimalsAntigenic VariationBirdsGenotypeHumansInfluenza A Virus, H1N1 SubtypeInfluenza A Virus, H3N2 SubtypeInfluenza, HumanMutationOrthomyxoviridae InfectionsPhylogenyReassortant VirusesRNA, ViralRNA, Viralevolutionevolutionary constraintinfluenza A viruspackagingreassortmentsegment mismatch

Identifiers

PMID29244017
PMCPMC5882089
OpenAlexW2772517777

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.