Evidence map›Paper›PMID 29242174›Full record

ArticleJMIR medical informatics2017

Standard Anatomic Terminologies: Comparison for Use in a Health Information Exchange-Based Prior Computed Tomography (CT) Alerting System.

Anton Oscar Beitia, Tina Lowry, Daniel J Vreeman, George T Loo, Bradley N Delman, Frederick L Thum, Benjamin H Slovis, Jason S Shapiro

Abstract read
In one paragraph

Article in JMIR medical informatics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Normalizing Clinical Document Titles to LOINC Document Ontology: an Initial Study.AMIA ... Annual Symposium proceedings. AMIA Symposium · 2020
    Article
  2. The LOINC RSNA radiology playbook - a unified terminology for radiology procedures.Journal of the American Medical Informatics Association : JAMIA · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Anton Oscar BeitiaDepartment of Emergency Medicine, Icahn School of Medicine at Mount Sinai, New York, NY, United States.ORCID http://orcid.org/0000-0003-3644-1724
Tina LowryDepartment of Emergency Medicine, Icahn School of Medicine at Mount Sinai, New York, NY, United States.ORCID http://orcid.org/0000-0003-0572-5476
Daniel J VreemanCenter for Biomedical Informatics, Regenstrief Institute, Indianapolis, IN, United States.ORCID http://orcid.org/0000-0001-5119-6531
George T LooDepartment of Emergency Medicine, Icahn School of Medicine at Mount Sinai, New York, NY, United States.ORCID http://orcid.org/0000-0002-3674-0567
Bradley N DelmanDepartment of Radiology, Icahn School of Medicine at Mount Sinai, New York, NY, United States.ORCID http://orcid.org/0000-0002-9792-8942
Frederick L ThumDepartment of Emergency Medicine, Icahn School of Medicine at Mount Sinai, New York, NY, United States.ORCID http://orcid.org/0000-0003-1788-5549
Benjamin H SlovisDepartment of Emergency Medicine, Thomas Jefferson University, Philadelphia, PA, United States.ORCID http://orcid.org/0000-0003-4396-3512
Jason S ShapiroDepartment of Emergency Medicine, Icahn School of Medicine at Mount Sinai, New York, NY, United States.ORCID http://orcid.org/0000-0002-4719-3730

Funding

Terminology Services to Reduce Avoidable CT ImagingR01LM012196 · NLM · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI SHAPIRO, JASON SCOTT · 2015 to 2017
$1.6M
NLM NIH HHS R01 LM012196
6 · The paper itself

Abstract

backgroundA health information exchange (HIE)-based prior computed tomography (CT) alerting system may reduce avoidable CT imaging by notifying ordering clinicians of prior relevant studies when a study is ordered. For maximal effectiveness, a system would alert not only for prior same CTs (exams mapped to the same code from an exam name terminology) but also for similar CTs (exams mapped to different exam name terminology codes but in the same anatomic region) and anatomically proximate CTs (exams in adjacent anatomic regions). Notification of previous same studies across an HIE requires mapping of local site CT codes to a standard terminology for exam names (such as Logical Observation Identifiers Names and Codes [LOINC]) to show that two studies with different local codes and descriptions are equivalent. Notifying of prior similar or proximate CTs requires an additional mapping of exam codes to anatomic regions, ideally coded by an anatomic terminology. Several anatomic terminologies exist, but no prior studies have evaluated how well they would support an alerting use case.

objectiveThe aim of this study was to evaluate the fitness of five existing standard anatomic terminologies to support similar or proximate alerts of an HIE-based prior CT alerting system.

methodsWe compared five standard anatomic terminologies (Foundational Model of Anatomy, Systematized Nomenclature of Medicine Clinical Terms, RadLex, LOINC, and LOINC/Radiological Society of North America [RSNA] Radiology Playbook) to an anatomic framework created specifically for our use case (Simple ANatomic Ontology for Proximity or Similarity [SANOPS]), to determine whether the existing terminologies could support our use case without modification. On the basis of an assessment of optimal terminology features for our purpose, we developed an ordinal anatomic terminology utility classification. We mapped samples of 100 random and the 100 most frequent LOINC CT codes to anatomic regions in each terminology, assigned utility classes for each mapping, and statistically compared each terminology's utility class rankings. We also constructed seven hypothetical alerting scenarios to illustrate the terminologies' differences.

resultsBoth RadLex and the LOINC/RSNA Radiology Playbook anatomic terminologies ranked significantly better (P<.001) than the other standard terminologies for the 100 most frequent CTs, but no terminology ranked significantly better than any other for 100 random CTs. Hypothetical scenarios illustrated instances where no standard terminology would support appropriate proximate or similar alerts, without modification.

conclusionsLOINC/RSNA Radiology Playbook and RadLex's anatomic terminologies appear well suited to support proximate or similar alerts for commonly ordered CTs, but for less commonly ordered tests, modification of the existing terminologies with concepts and relations from SANOPS would likely be required. Our findings suggest SANOPS may serve as a framework for enhancing anatomic terminologies in support of other similar use cases.

Indexed as

anatomy, regionalhealth information exchangeradiation dosageterminologytomography, x-ray computed

Identifiers

PMID29242174
PMCPMC5746622

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.