Evidence map›Paper›PMID 29241005›Full record

ArticleACS synthetic biology2018

Spatiotemporal Control of TGF-β Signaling with Light.

Yuchao Li, Minji Lee, Nury Kim, Guoyu Wu, Difan Deng, Jin Man Kim, Xuedong Liu, Won Do Heo, Zhike Zi

Open access · greenAbstract read
In one paragraph

Article in ACS synthetic biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
9.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 43 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Optogenetic control of Nodal signaling patterns.Development (Cambridge, England) · 2025
    Article
  6. Article
  7. Optogenetic control of Nodal signaling patterns.bioRxiv : the preprint server for biology · 2024
    Article
  8. Article
  9. Review
  10. Review
  11. Article
  12. Review
  13. Review
  14. Article
  15. Article
  16. Review
  17. Under the spotlight: mechanisms of photobiomodulation concentrating on blue and green light.Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology · 2019
    Article
  18. Review
  19. Optical Activation of TrkA Signaling.ACS synthetic biology · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 3 countries.

Yuchao LiOtto-Warburg Laboratory, Max Planck Institute for Molecular Genetics , Berlin 14195, Germany.
Minji LeeDepartment of Biological Sciences, Korea Advanced Institute of Science and Technology , Daejeon 34141, Republic of Korea.
Nury KimCenter for Cognition and Sociality, Institute for Basic Science (IBS) , Daejeon 34141, Republic of Korea.
Guoyu WuOtto-Warburg Laboratory, Max Planck Institute for Molecular Genetics , Berlin 14195, Germany.
Difan DengOtto-Warburg Laboratory, Max Planck Institute for Molecular Genetics , Berlin 14195, Germany.
Jin Man KimDepartment of Biological Sciences, Korea Advanced Institute of Science and Technology , Daejeon 34141, Republic of Korea.
Xuedong LiuDepartment of Chemistry and Biochemistry, University of Colorado Boulder , Boulder, Colorado 80309-0596, United States.
Won Do HeoDepartment of Biological Sciences, Korea Advanced Institute of Science and Technology , Daejeon 34141, Republic of Korea.
Zhike ZiOtto-Warburg Laboratory, Max Planck Institute for Molecular Genetics , Berlin 14195, Germany.ORCID 0000-0002-7601-915X
Korea Advanced Institute of Science and Technology · KRMax Planck Institute for Molecular Genetics · DEInstitute for Basic Science · KRSeoul National University · KRUniversity of Colorado Boulder · US

Funding

Quantitative Analysis of Mechanochemical Signaling in Wound ResponseR01AR068254 · NIAMS · UNIVERSITY OF COLORADO · PI LIU, XUEDONG · 2015 to 2021
$1.8M
FACSAria Fusion Cell SorterS10OD021601 · OD · UNIVERSITY OF COLORADO · PI LIU, XUEDONG · 2016 to 2016
$599k
ImageXpress Micro Cellular Imagining and Analysis SystemS10RR026680 · NCRR · UNIVERSITY OF COLORADO · PI LIU, XUEDONG · 2011 to 2011
$380k
NCRR NIH HHS S10 RR026680NIAMS NIH HHS R01 AR068254NIH HHS S10 OD021601
6 · The paper itself

Abstract

Cells employ signaling pathways to make decisions in response to changes in their immediate environment. Transforming growth factor beta (TGF-β) is an important growth factor that regulates many cellular functions in development and disease. Although the molecular mechanisms of TGF-β signaling have been well studied, our understanding of this pathway is limited by the lack of tools that allow the control of TGF-β signaling with high spatiotemporal resolution. Here, we developed an optogenetic system (optoTGFBRs) that enables the precise control of TGF-β signaling in time and space. Using the optoTGFBRs system, we show that TGF-β signaling can be selectively and sequentially activated in single cells through the modulation of the pattern of light stimulations. By simultaneously monitoring the subcellular localization of TGF-β receptor and Smad2 proteins, we characterized the dynamics of TGF-β signaling in response to different patterns of blue light stimulations. The spatial and temporal precision of light control will make the optoTGFBRs system as a powerful tool for quantitative analyses of TGF-β signaling at the single cell level.

Indexed as

LightReceptors, Transforming Growth Factor betaSmad2 ProteinTransforming Growth Factor betaHeLa CellsHumansOptogeneticsSignal TransductionReceptors, Transforming Growth Factor betaSmad2 ProteinSMAD2 protein, humanTransforming Growth Factor betacell signalingoptogeneticsSmad2TGF-beta

Identifiers

PMID29241005
PMCPMC6116903
OpenAlexW2772710198

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.