Evidence map›Paper›PMID 29240891›Full record

ArticleThe Journal of clinical endocrinology and metabolism2018

Primary Ovarian Insufficiency and Azoospermia in Carriers of a Homozygous PSMC3IP Stop Gain Mutation.

Abdulmoein Eid Al-Agha, Ihab Abdulhamed Ahmed, Esther Nuebel, Mika Moriwaki, Barry Moore, Katherine A Peacock, Tim Mosbruger, Deborah W Neklason, Lynn B Jorde, Mark Yandell and 1 more

Open access · bronzeAbstract readCase ReportsMulticenter Study
In one paragraph

Article in The Journal of clinical endocrinology and metabolism, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed, 1 pooled it
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 1 synthesis or guideline pooled it, 61 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Article
  5. Review
  6. Review
  7. A Human HomozygousGenes · 2024
    Article
  8. Article
  9. Article
  10. Review
  11. Mechanisms of ovarian aging in women: a review.Journal of ovarian research · 2023
    Review
  12. Selected Genetic Factors Associated with Primary Ovarian Insufficiency.International journal of molecular sciences · 2023
    Review
  13. Article
  14. Article
  15. Article
  16. Observational
  17. Review
  18. Article
  19. Article
  20. Genetics of Azoospermia.International journal of molecular sciences · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Abdulmoein Eid Al-AghaPediatric Department, King Abdulaziz University Hospital, Jeddah, Saudi Arabia.
Ihab Abdulhamed AhmedPediatric Department, King Abdulaziz University Hospital, Jeddah, Saudi Arabia.
Esther NuebelHoward Hughes Medical Institute and Department of Biochemistry, University of Utah, Salt Lake City, Utah.
Mika MoriwakiDivision of Endocrinology, Metabolism and Diabetes, University of Utah, Salt Lake City, Utah.
Barry MooreUStar Center for Genetic Discovery, Department of Human Genetics, University of Utah, Salt Lake City, Utah.
Katherine A PeacockDivision of Endocrinology, Metabolism and Diabetes, University of Utah, Salt Lake City, Utah.
Tim MosbrugerBioinformatics, Huntsman Cancer Institute, University of Utah, Salt Lake City, Utah.
Deborah W NeklasonDivision of Genetic Epidemiology, Department of Internal Medicine, University of Utah, Salt Lake City, Utah.
Lynn B JordeUStar Center for Genetic Discovery, Department of Human Genetics, University of Utah, Salt Lake City, Utah.
Mark YandellUStar Center for Genetic Discovery, Department of Human Genetics, University of Utah, Salt Lake City, Utah.
Corrine K WeltDivision of Endocrinology, Metabolism and Diabetes, University of Utah, Salt Lake City, Utah.
University of Utah · USStar Center · USKing Abdulaziz University · SA

Funding

UTAH REGIONAL CANCER CENTERP30CA042014 · NCI · UTAH STATE HIGHER EDUCATION SYSTEM--UNIVERSITY OF UTAH · PI KATHARINE S ULLMAN · 1986 to 2026
$72.6M
University of Utah Center for Clinical and Translational ScienceUL1TR001067 · NCATS · UNIVERSITY OF UTAH · PI DERE, WILLARD H., HESS, RACHEL · 2013 to 2017
$19.8M
POPULATION GENETICS OF MOBILE ELEMENTSR01GM059290 · NIGMS · UNIVERSITY OF UTAH · PI BATZER, MARK A, FESCHOTTE, CEDRIC · 1999 to 2018
$8.5M
Human Genetic Variation and DiseaseR35GM118335 · NIGMS · UTAH STATE HIGHER EDUCATION SYSTEM--UNIVERSITY OF UTAH · PI JORDE, LYNN · 2016 to 2025
$5.1M
VAAST+: Tool for variant prioritization, risk assessment and disease-gene findingR01GM104390 · NIGMS · UNIVERSITY OF UTAH · PI JORDE, LYNN, YANDELL, MARK DOUGLAS · 2013 to 2017
$2.2M
The Genetics of Primary Ovarian InsufficiencyR56HD090159 · NICHD · UNIVERSITY OF UTAH · PI WELT, CORRINE K · 2017 to 2017
$300k
NCATS NIH HHS UL1 TR001067NCI NIH HHS P30 CA042014NICHD NIH HHS R56 HD090159NIGMS NIH HHS R01 GM059290NIGMS NIH HHS R01 GM104390NIGMS NIH HHS R35 GM118335
6 · The paper itself

Abstract

Context: The etiology of primary ovarian insufficiency (POI) remains unknown in most cases. Objective: We sought to identify the genes causing POI. Design: The study was a familial genetic study. Setting: The study was performed at two academic institutions. Patients: We identified a consanguineous Yemeni family in which four daughters had POI. A brother had azoospermia. Intervention: DNA was subjected to whole genome sequencing. Shared regions of homozygosity were identified using Truploidy and prioritized using the Variant Annotation, Analysis, and Search Tool with control data from 387 healthy subjects. Imaging and quantification of protein localization and mitochondrial function were examined in cell lines. Main Outcome: Homozygous recessive gene variants shared by the four sisters. Results: The sisters shared a homozygous stop gain mutation in exon 6 of PSMC3IP (c.489 C>G, p.Tyr163Ter) and a missense variant in exon 1 of CLPP (c.100C>T, p.Pro34Ser). The affected brother also carried the homozygous PSMC3IP mutation. Functional studies demonstrated mitochondrial fragmentation in cells infected with the CLPP mutation. However, no abnormality was found in mitochondrial targeting or respiration. Conclusions: The PSMC3IP mutation provides additional evidence that mutations in meiotic homologous recombination and DNA repair genes result in distinct female and male reproductive phenotypes, including delayed puberty and primary amenorrhea caused by POI (XX gonadal dysgenesis) in females but isolated azoospermia with normal pubertal development in males. The findings also suggest that the N-terminal missense mutation in CLPP does not cause substantial mitochondrial dysfunction or contribute to ovarian insufficiency in an oligogenic manner.

Indexed as

Gain of Function MutationAdultAzoospermiaCells, CulturedConsanguinityFamilyFemaleHeterozygoteHomozygoteHumansMaleMenopause, PrematureNuclear ProteinsPedigreePrimary Ovarian InsufficiencyTrans-ActivatorsNuclear ProteinsPSMC3IP protein, humanTrans-Activators

Identifiers

PMID29240891
PMCPMC5800840
OpenAlexW2774915373

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.