ArticleFrontiers in microbiology2017
An Assessment of Different Genomic Approaches for Inferring Phylogeny of
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Article in Frontiers in microbiology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.
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36citing papers in PubMed
–field-weighted citation impact
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
36 citing papers in PubMed.
- Listeriosis.Nature reviews. Disease primers · 2025Review
- Exploratory Genomic Marker Analysis of Virulence Patterns inFoods (Basel, Switzerland) · 2025Article
- refMLST: reference-based multilocus sequence typing enables universal bacterial typing.BMC bioinformatics · 2024Article
- Average Nucleotide Identity and Digital DNA-DNA Hybridization Analysis Following PromethION Nanopore-Based Whole Genome Sequencing Allows for Accurate Prokaryotic Typing.Diagnostics (Basel, Switzerland) · 2024Article
- Comparison of gene-by-gene and genome-wide short nucleotide sequence-based approaches to define the global population structure ofMicrobial genomics · 2024Article
- Harmonization of supervised machine learning practices for efficient source attribution of Listeria monocytogenes based on genomic data.BMC genomics · 2023Article
- Taking hospital pathogen surveillance to the next level.Microbial genomics · 2023Article
- New insights into the epidemiology ofFrontiers in microbiology · 2023Article
- Development and Evaluation of a Core Genome Multilocus Sequencing Typing (cgMLST) Scheme for Serratia marcescens Molecular Surveillance and Outbreak Investigations.Journal of clinical microbiology · 2022Article
- PervasiveApplied and environmental microbiology · 2022Review
- Relevance of prokaryotic subspecies in the age of genomics.New microbes and new infections · 2022Article
- Phylogenetic and Phenotypic Analyses of a Collection of Food and Clinical Listeria monocytogenes Isolates Reveal Loss of Function of Sigma B from Several Clonal Complexes.Applied and environmental microbiology · 2022Article
- Whole-Genome Sequencing Analysis of Listeria monocytogenes from Rural, Urban, and Farm Environments in Norway: Genetic Diversity, Persistence, and Relation to Clinical and Food Isolates.Applied and environmental microbiology · 2022Article
- Genetic Diversity and Relationships ofMicroorganisms · 2022Article
- Evaluation of whole-genome sequencing-based subtyping methods for the surveillance ofMicrobial genomics · 2021Article
- Genomic analysis revealed a novel genotype of methicillin-susceptible Staphylococcus aureus isolated from a fatal sepsis case in dengue patient.Scientific reports · 2021Article
- Article
- Word Entropy-Based Approach to Detect Highly Variable Genetic Markers for Bacterial Genotyping.Frontiers in microbiology · 2021Article
- An Open-Source Program (Haplo-ST) for Whole-Genome Sequence Typing Shows Extensive Diversity among Listeria monocytogenes Isolates in Outdoor Environments and Poultry Processing Plants.Applied and environmental microbiology · 2020Article
- Population Structure of Non-ST6Microorganisms · 2020Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
13 authors.
Clémentine HenriAgence Nationale de Sécurité Sanitaire de l'Alimentation, Maisons-Alfort Laboratory for Food Safety, University Paris-Est, Maisons-Alfort, France.
Pimlapas LeekitcharoenphonEuropean Union Reference Laboratory for Antimicrobial Resistance, National Food Institute, WHO Collaborating Center for Antimicrobial Resistance in Food Borne Pathogens and Genomics, Technical University of Denmark, Kongens Lyngby, Denmark.
Heather A CarletonNational Center for Emerging and Zoonotic Infectious Diseases, Centers for Disease Control and Prevention, Atlanta, GA, United States.
Nicolas RadomskiAgence Nationale de Sécurité Sanitaire de l'Alimentation, Maisons-Alfort Laboratory for Food Safety, University Paris-Est, Maisons-Alfort, France.
Rolf S KaasEuropean Union Reference Laboratory for Antimicrobial Resistance, National Food Institute, WHO Collaborating Center for Antimicrobial Resistance in Food Borne Pathogens and Genomics, Technical University of Denmark, Kongens Lyngby, Denmark.
Jean-François MarietAgence Nationale de Sécurité Sanitaire de l'Alimentation, Maisons-Alfort Laboratory for Food Safety, University Paris-Est, Maisons-Alfort, France.
Arnaud FeltenAgence Nationale de Sécurité Sanitaire de l'Alimentation, Maisons-Alfort Laboratory for Food Safety, University Paris-Est, Maisons-Alfort, France.
Frank M AarestrupEuropean Union Reference Laboratory for Antimicrobial Resistance, National Food Institute, WHO Collaborating Center for Antimicrobial Resistance in Food Borne Pathogens and Genomics, Technical University of Denmark, Kongens Lyngby, Denmark.
Peter Gerner SmidtNational Center for Emerging and Zoonotic Infectious Diseases, Centers for Disease Control and Prevention, Atlanta, GA, United States.
Sophie RousselAgence Nationale de Sécurité Sanitaire de l'Alimentation, Maisons-Alfort Laboratory for Food Safety, University Paris-Est, Maisons-Alfort, France.
Laurent GuillierAgence Nationale de Sécurité Sanitaire de l'Alimentation, Maisons-Alfort Laboratory for Food Safety, University Paris-Est, Maisons-Alfort, France.
Michel-Yves MistouAgence Nationale de Sécurité Sanitaire de l'Alimentation, Maisons-Alfort Laboratory for Food Safety, University Paris-Est, Maisons-Alfort, France.
René S HendriksenEuropean Union Reference Laboratory for Antimicrobial Resistance, National Food Institute, WHO Collaborating Center for Antimicrobial Resistance in Food Borne Pathogens and Genomics, Technical University of Denmark, Kongens Lyngby, Denmark.
Funding
No grant is acknowledged in the PubMed record.
Abstract
PubMed holds no abstract for this paper.
Indexed as
cgMLSTconventional MLSTListeria monocytogenesPFGESNPssurveillancewgMLSTWGS
Identifiers
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LicenceCC BY
Read underepoch 390
Registered trials
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.