Evidence map›Paper›PMID 29236296›Full record

ReviewBioEssays : news and reviews in molecular, cellular and developmental biology2018

RNA Decay Factor UPF1 Promotes Protein Decay: A Hidden Talent.

Terra-Dawn M Plank, Miles F Wilkinson

Open access · greenAbstract readReview
In one paragraph

Review in BioEssays : news and reviews in molecular, cellular and developmental biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.3field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Terra-Dawn M PlankDepartment of Reproductive Medicine, University of California San Diego, La Jolla, CA, 92093-0695, USA.
Miles F WilkinsonDepartment of Reproductive Medicine, University of California San Diego, La Jolla, CA, 92093-0695, USA.
University of California, San Diego · US

Funding

TRAINING IN REPRODUCTIVE SCIENCEST32HD007203 · NICHD · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI PAMELA L MELLON · 1988 to 2026
$4.8M
The Role of NMD in Olfactory NeurogenesisR01GM111838 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI WILKINSON, MILES FROME · 2014 to 2017
$1.6M
The role of the nonsense mediated RNA decay pathway in regulating cell fateF32GM113487 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI BRANNAN, TERRA-DAWN PLANK · 2015 to 2016
$109k
NICHD NIH HHS T32 HD007203NIGMS NIH HHS F32 GM113487NIGMS NIH HHS R01 GM111838
6 · The paper itself

Abstract

The RNA-binding protein, UPF1, is best known for its central role in the nonsense-mediated RNA decay (NMD) pathway. Feng et al. now report a new function for UPF1-it is an E3 ubiquitin ligase that specifically promotes the decay of a key pro-muscle transcription factor: MYOD. UPF1 achieves this through its RING-like domain, which confers ubiquitin E3 ligase activity. Feng et al. provide evidence that the ability of UPF1 to destabilize MYOD represses myogenesis. In the future, it will be important to define other protein substrates of UPF1-driven ubiquitination and to determine whether this biochemical activity is responsible for some of UPF1's previously defined biological functions, including in development and stress responses. The exciting findings presented by Feng et al. open up the possibility that protein turnover and RNA turnover are coupled processes.

Indexed as

Nonsense Mediated mRNA DecayEpigenetic RepressionHumansMuscle DevelopmentMyoD ProteinProteolysisProteomeRNA HelicasesTrans-ActivatorsUbiquitinationUbiquitin-Protein LigasesMyoD1 myogenic differentiation proteinMyoD ProteinProteomeRNA HelicasesTrans-ActivatorsUbiquitin-Protein LigasesUPF1 protein, humandevelopmentE3 ligasemyogenesisnonsense-mediated decayproteasomeubiquitination

Identifiers

PMID29236296
PMCPMC5843485
OpenAlexW2774448047

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.