Evidence map›Paper›PMID 29235675›Full record

ArticleFEBS letters2018

Evidence for a hierarchical transcriptional circuit in Drosophila male germline involving testis-specific TAF and two gene-specific transcription factors, Mod and Acj6.

Mei Jiang, Zhengliang Gao, Jian Wang, Dmitry I Nurminsky

Open access · hybridAbstract read
In one paragraph

Article in FEBS letters, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.4field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 5 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 2 countries.

Mei JiangShanghai Tenth People's Hospital, Tongji University School of Medicine, Shanghai, China.
Zhengliang GaoShanghai Tenth People's Hospital, Tongji University School of Medicine, Shanghai, China.
Jian WangKey Laboratory of Aquaculture Resources and Utilization, Ministry of Education, College of Fisheries and Life Science, Shanghai Ocean University, China.
Dmitry I NurminskyDepartment of Biochemistry and Molecular Biology, School of Medicine, University of Maryland, Baltimore, MD, USA.
Tongji University · CNShanghai Ocean University · CNUniversity of Maryland, Baltimore · US

Funding

TRANSCRIPTIONAL REGULATION IN DROSOPHILA SPERMATOGENESISR01GM061549 · NIGMS · UNIVERSITY OF MARYLAND BALTIMORE · PI NURMINSKY, DMITRY I · 2000 to 2010
$1.7M
NIGMS NIH HHS R01 GM061549
6 · The paper itself

Abstract

To analyze transcription factors involved in gene regulation by testis-specific TAF (tTAF), tTAF-dependent promoters were mapped and analyzed in silico. Core promoters show decreased AT content, paucity of classical promoter motifs, and enrichment with translation control element CAAAATTY. Scanning of putative regulatory regions for known position frequency matrices identified 19 transcription regulators possibly contributing to tTAF-driven gene expression. Decreased male fertility associated with mutation in one of the regulators, Acj6, indicates its involvement in male reproduction. Transcriptome study of testes from male mutants for tTAF, Acj6, and previously characterized tTAF-interacting factor Modulo implies the existence of a regulatory hierarchy of tTAF, Modulo and Acj6, in which Modulo and/or Acj6 regulate one-third of tTAF-dependent genes.

Indexed as

AnimalsChromatin Assembly and DisassemblyComputer SimulationDNA-Binding ProteinsDrosophila melanogasterDrosophila ProteinsGene Expression RegulationGene Regulatory NetworksGenes, InsectMaleMutationNerve Tissue ProteinsPOU Domain FactorsPromoter Regions, GeneticRNA-Binding ProteinsSpermatocytesacj6 protein, DrosophilaDNA-Binding ProteinsDrosophila Proteinsmod protein, DrosophilaNerve Tissue ProteinsPOU Domain FactorsRNA-Binding ProteinsTATA-Binding Protein Associated FactorsDrosophilagene-specific transcription regulatorhierarchical transcriptional circuitspermatogenesistestis-specific TAF

Identifiers

PMID29235675
PMCPMC5785934
OpenAlexW2772694165

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.