Evidence map›Paper›PMID 29235573›Full record

ArticleScientific reports2017

Constitutively elevated levels of SOCS1 suppress innate responses in DF-1 immortalised chicken fibroblast cells.

E S Giotis, C S Ross, R C Robey, A Nohturfft, S Goodbourn, M A Skinner

Open access · goldAbstract readComparative Study
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
2.4field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 39 citations in OpenAlex.

  1. Review
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  15. The Stronger Downregulation ofFrontiers in cellular and infection microbiology · 2020
    Article
  16. Identification of a HumanFrontiers in immunology · 2020
    Article
  17. Article
  18. Article
  19. Genes · 2019
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

E S GiotisSection of Virology, School of Medicine, St Mary's Campus, Imperial College London, London, W2 1PG, UK.
C S RossInstitute for Infection and Immunity, St George's, University of London, London, SW17 0RE, UK.
R C RobeySection of Virology, School of Medicine, St Mary's Campus, Imperial College London, London, W2 1PG, UK.
A NohturfftInstitute for Infection and Immunity, St George's, University of London, London, SW17 0RE, UK.
S GoodbournInstitute for Infection and Immunity, St George's, University of London, London, SW17 0RE, UK.
M A SkinnerSection of Virology, School of Medicine, St Mary's Campus, Imperial College London, London, W2 1PG, UK. m.skinner@imperial.ac.uk.ORCID 0000-0002-0050-4167
St George's, University of London · GBImperial College London · GBSt Mary's Hospital · GB

Funding

Biotechnology and Biological Sciences Research Council BB/H005323/1Biotechnology and Biological Sciences Research Council BB/K002465/1
6 · The paper itself

Abstract

The spontaneously immortalised DF-1 cell line is rapidly replacing its progenitor primary chicken embryo fibroblasts (CEFs) for studies on avian viruses such as avian influenza but no comprehensive study has as yet been reported comparing their innate immunity phenotypes. We conducted microarray analyses of DF-1 and CEFs, under both normal and stimulated conditions using chicken interferon-α (chIFN-α) and the attenuated infectious bursal disease virus vaccine strain PBG98. We found that DF-1 have an attenuated innate response compared to CEFs. Basal expression levels of Suppressor of Cytokine Signalling 1 (chSOCS1), a negative regulator of cytokine signalling in mammals, are 16-fold higher in DF-1 than in CEFs. The chSOCS1 "SOCS box" domain (which in mammals, interacts with an E3 ubiquitin ligase complex) is not essential for the inhibition of cytokine-induced JAK/STAT signalling activation in DF-1. Overexpression of SOCS1 in chIFN-α-stimulated DF-1 led to a relative decrease in expression of interferon-stimulated genes (ISGs; MX1 and IFIT5) and increased viral yield in response to PBG98 infection. Conversely, knockdown of SOCS1 enhanced induction of ISGs and reduced viral yield in chIFN-α-stimulated DF-1. Consequently, SOCS1 reduces induction of the IFN signalling pathway in chicken cells and can potentiate virus replication.

Indexed as

AnimalsAvian ProteinsBird DiseasesBirnaviridae InfectionsCell LineCell ProliferationChickensFibroblastsGene ExpressionGene Knockdown TechniquesImmunity, InnateInfectious bursal disease virusInterferon-alphaJanus KinasesMicroarray AnalysisPrimary Cell CultureAvian ProteinsInterferon-alphaJanus KinasesSTAT Transcription FactorsSuppressor of Cytokine Signaling 1 Protein

Identifiers

PMID29235573
PMCPMC5727488
OpenAlexW2773314102

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.