Evidence map›Paper›PMID 29235475›Full record

ArticleNature communications2017

Structural and functional dissection of the DH and PH domains of oncogenic Bcr-Abl tyrosine kinase.

Sina Reckel, Charlotte Gehin, Delphine Tardivon, Sandrine Georgeon, Tim Kükenshöner, Frank Löhr, Akiko Koide, Lena Buchner, Alejandro Panjkovich, Aline Reynaud and 9 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
2.9field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 54 citations in OpenAlex.

  1. Article
  2. Article
  3. Current and future of targeted therapies against BCR::ABL kinases.Journal of the Egyptian National Cancer Institute · 2025
    Review
  4. The Role of the Swollen State in Cell Proliferation.The Journal of membrane biology · 2025
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  7. Journal of proteome research · 2023
    Article
  8. Article
  9. Article
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  11. Article
  12. Article
  13. Preparation of Novel Pyrazolo[4,3-International journal of molecular sciences · 2022
    Article
  14. Article
  15. Article
  16. Allosteric regulation of autoinhibition and activation of c-Abl.Computational and structural biotechnology journal · 2022
    Article
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 4 institutions in 4 countries.

Sina ReckelSwiss Institute for Experimental Cancer Research (ISREC), School of Life Sciences, École polytechnique fédérale de Lausanne (EPFL), 1015, Lausanne, Switzerland.
Charlotte GehinStructural and Computational Biology Unit, European Molecular Biology Laboratory (EMBL), 69117, Heidelberg, Germany.ORCID http://orcid.org/0000-0003-1164-2968
Delphine TardivonSwiss Institute for Experimental Cancer Research (ISREC), School of Life Sciences, École polytechnique fédérale de Lausanne (EPFL), 1015, Lausanne, Switzerland.
Sandrine GeorgeonSwiss Institute for Experimental Cancer Research (ISREC), School of Life Sciences, École polytechnique fédérale de Lausanne (EPFL), 1015, Lausanne, Switzerland.
Tim KükenshönerSwiss Institute for Experimental Cancer Research (ISREC), School of Life Sciences, École polytechnique fédérale de Lausanne (EPFL), 1015, Lausanne, Switzerland.
Frank LöhrInstitute of Biophysical Chemistry, Goethe University Frankfurt, 60438, Frankfurt, Germany.
Akiko KoideLaura and Isaac Perlmutter Cancer Center, New York University Langone Medical Center, New York, NY, 10016, USA.
Lena BuchnerInstitute of Biophysical Chemistry, Goethe University Frankfurt, 60438, Frankfurt, Germany.
Alejandro PanjkovichEuropean Molecular Biology Laboratory (EMBL), Hamburg Outstation, 22607, Hamburg, Germany.
Aline ReynaudProtein Crystallography Core Facility, School of Life Sciences, École polytechnique fédérale de Lausanne (EPFL), 1015, Lausanne, Switzerland.
Sara PinhoSwiss Institute for Experimental Cancer Research (ISREC), School of Life Sciences, École polytechnique fédérale de Lausanne (EPFL), 1015, Lausanne, Switzerland.
Barbara GerigSwiss Institute for Experimental Cancer Research (ISREC), School of Life Sciences, École polytechnique fédérale de Lausanne (EPFL), 1015, Lausanne, Switzerland.
Dmitri SvergunEuropean Molecular Biology Laboratory (EMBL), Hamburg Outstation, 22607, Hamburg, Germany.
Florence PojerProtein Crystallography Core Facility, School of Life Sciences, École polytechnique fédérale de Lausanne (EPFL), 1015, Lausanne, Switzerland.
Peter GüntertInstitute of Biophysical Chemistry, Goethe University Frankfurt, 60438, Frankfurt, Germany.
Volker DötschInstitute of Biophysical Chemistry, Goethe University Frankfurt, 60438, Frankfurt, Germany.
Shohei KoideLaura and Isaac Perlmutter Cancer Center, New York University Langone Medical Center, New York, NY, 10016, USA.ORCID http://orcid.org/0000-0001-5473-4358
Anne-Claude GavinStructural and Computational Biology Unit, European Molecular Biology Laboratory (EMBL), 69117, Heidelberg, Germany.
Oliver HantschelSwiss Institute for Experimental Cancer Research (ISREC), School of Life Sciences, École polytechnique fédérale de Lausanne (EPFL), 1015, Lausanne, Switzerland. oliver.hantschel@epfl.ch.ORCID http://orcid.org/0000-0001-8569-8169
École Polytechnique Fédérale de Lausanne · CHEuropean Molecular Biology Laboratory · DEGoethe University Frankfurt · DENYU Langone Health · US

Funding

Rational generation of directed protein-capture reagentsR01GM090324 · NIGMS · UNIVERSITY OF CHICAGO · PI KOIDE, SHOHEI · 2009 to 2013
$2.6M
NIGMS NIH HHS R01 GM090324
6 · The paper itself

Abstract

The two isoforms of the Bcr-Abl tyrosine kinase, p210 and p190, are associated with different leukemias and have a dramatically different signaling network, despite similar kinase activity. To provide a molecular rationale for these observations, we study the Dbl-homology (DH) and Pleckstrin-homology (PH) domains of Bcr-Abl p210, which constitute the only structural differences to p190. Here we report high-resolution structures of the DH and PH domains and characterize conformations of the DH-PH unit in solution. Our structural and functional analyses show no evidence that the DH domain acts as a guanine nucleotide exchange factor, whereas the PH domain binds to various phosphatidylinositol-phosphates. PH-domain mutants alter subcellular localization and result in decreased interactions with p210-selective interaction partners. Hence, the PH domain, but not the DH domain, plays an important role in the formation of the differential p210 and p190 Bcr-Abl signaling networks.

Indexed as

Models, MolecularPleckstrin Homology DomainsProtein DomainsCarcinogenesisCrystallography, X-RayFusion Proteins, bcr-ablHumansLeukemiaMagnetic Resonance SpectroscopyScattering, Small AngleSignal TransductionX-Ray DiffractionFusion Proteins, bcr-abl

Identifiers

PMID29235475
PMCPMC5727386
OpenAlexW2771548712

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.