Evidence map›Paper›PMID 29233978›Full record

ArticleNature communications2017

An oomycete plant pathogen reprograms host pre-mRNA splicing to subvert immunity.

Jie Huang, Lianfeng Gu, Ying Zhang, Tingxiu Yan, Guanghui Kong, Liang Kong, Baodian Guo, Min Qiu, Yang Wang, Maofeng Jing and 8 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 57 papers.

0numbers the graph read from it
0cells of the map it votes in
57citing papers in PubMed
16.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

57 citing papers in PubMed, 119 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Pathogen-inspired engineering of plant protease enhances late blight resistance.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  5. Review
  6. RNA-binding proteins orchestrating immunity in plants.The Plant journal : for cell and molecular biology · 2025
    Review
  7. Article
  8. Article
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  13. Review
  14. APlants (Basel, Switzerland) · 2025
    Article
  15. Review
  16. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 5 institutions in 2 countries.

Jie HuangDepartment of Plant Pathology, Nanjing Agricultural University, Nanjing, 210095, China.ORCID http://orcid.org/0000-0002-6657-8740
Lianfeng GuBasic Forestry and Proteomics Research Center, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, Fujian Agriculture and Forestry University, Fuzhou, 350002, China.ORCID http://orcid.org/0000-0002-3810-2411
Ying ZhangDepartment of Plant Pathology, Nanjing Agricultural University, Nanjing, 210095, China.
Tingxiu YanDepartment of Plant Pathology, Nanjing Agricultural University, Nanjing, 210095, China.
Guanghui KongDepartment of Plant Pathology, Nanjing Agricultural University, Nanjing, 210095, China.
Liang KongDepartment of Plant Pathology, Nanjing Agricultural University, Nanjing, 210095, China.
Baodian GuoDepartment of Plant Pathology, Nanjing Agricultural University, Nanjing, 210095, China.
Min QiuDepartment of Plant Pathology, Nanjing Agricultural University, Nanjing, 210095, China.
Yang WangDepartment of Plant Pathology, Nanjing Agricultural University, Nanjing, 210095, China.
Maofeng JingDepartment of Plant Pathology, Nanjing Agricultural University, Nanjing, 210095, China.
Weiman XingShanghai Center for Plant Stress Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai, 201602, China.
Wenwu YeDepartment of Plant Pathology, Nanjing Agricultural University, Nanjing, 210095, China.ORCID http://orcid.org/0000-0001-7347-8935
Zhe WuDepartment of Biology, South University of Science and Technology of China, Shenzhen, Guangdong, 518055, China.ORCID http://orcid.org/0000-0001-9436-3299
Zhengguang ZhangDepartment of Plant Pathology, Nanjing Agricultural University, Nanjing, 210095, China.
Xiaobo ZhengDepartment of Plant Pathology, Nanjing Agricultural University, Nanjing, 210095, China.
Mark GijzenAgriculture and Agri-Food Canada, London, ON, N5V 4T3, Canada.ORCID http://orcid.org/0000-0002-3715-6389
Yuanchao WangDepartment of Plant Pathology, Nanjing Agricultural University, Nanjing, 210095, China.ORCID http://orcid.org/0000-0001-5803-5343
Suomeng DongDepartment of Plant Pathology, Nanjing Agricultural University, Nanjing, 210095, China. smdong@njau.edu.cn.ORCID http://orcid.org/0000-0002-9623-6776
Nanjing Agricultural University · CNAgriculture and Agri-Food Canada · CAChinese Academy of Sciences · CNFujian Agriculture and Forestry University · CNSouthern University of Science and Technology · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The process of RNA splicing influences many physiological processes, including plant immunity. However, how plant parasites manipulate host RNA splicing process remains unknown. Here we demonstrate that PsAvr3c, an avirulence effector from oomycete plant pathogen Phytophthora sojae, physically binds to and stabilizes soybean serine/lysine/arginine-rich proteins GmSKRPs. The SKRPs are novel proteins that associate with a complex that contains plant spliceosome components, and are negative regulators of plant immunity. Analysis by RNA-seq data indicates that alternative splicing of pre-mRNAs from 401 soybean genes, including defense-related genes, is altered in GmSKRP1 and PsAvr3c overexpressing lines compared to control plants. Representative splicing events mediated by GmSKRP1 and PsAvr3c are tested by infection assays or by transient expression in soybean plants. Our results show that plant pathogen effectors can reprogram host pre-mRNA splicing to promote disease, and we propose that pathogens evolved such strategies to defeat host immune systems.

Indexed as

Alternative SplicingGene Expression Regulation, PlantGlycine maxHost-Pathogen InteractionsPhytophthoraPlant DiseasesPlant ImmunityRNA, PlantRNA PrecursorsSequence Analysis, RNASoybean ProteinsSpliceosomesVirulence FactorsRNA, PlantRNA PrecursorsSoybean ProteinsVirulence Factors

Identifiers

PMID29233978
PMCPMC5727057
OpenAlexW2774786034

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.