Evidence map›Paper›PMID 29233929›Full record

ArticleCancer research2018

Single-Cell RNA-seq Reveals a Subpopulation of Prostate Cancer Cells with Enhanced Cell-Cycle-Related Transcription and Attenuated Androgen Response.

Aaron M Horning, Yao Wang, Che-Kuang Lin, Anna D Louie, Rohit R Jadhav, Chia-Nung Hung, Chiou-Miin Wang, Chun-Lin Lin, Nameer B Kirma, Michael A Liss and 8 more

Abstract read
In one paragraph

Article in Cancer research, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 78 papers.

0numbers the graph read from it
0cells of the map it votes in
78citing papers in PubMed
7.4field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

78 citing papers in PubMed, 125 citations in OpenAlex.

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  20. miR-362-3p inhibited the invasion and metastasis of oral squamous cell carcinoma cells by targeting the regulation of pituitary tumor-transforming gene 1.Hua xi kou qiang yi xue za zhi = Huaxi kouqiang yixue zazhi = West China journal of stomatology · 2024
    Article

18 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 1 institution in 1 country.

Aaron M HorningDepartment of Molecular Medicine, University of Texas Health Science Center at San Antonio, San Antonio, Texas.
Yao WangDepartment of Molecular Medicine, University of Texas Health Science Center at San Antonio, San Antonio, Texas.
Che-Kuang LinDepartment of Molecular Medicine, University of Texas Health Science Center at San Antonio, San Antonio, Texas.
Anna D LouieDepartment of Molecular Medicine, University of Texas Health Science Center at San Antonio, San Antonio, Texas.
Rohit R JadhavDepartment of Molecular Medicine, University of Texas Health Science Center at San Antonio, San Antonio, Texas.
Chia-Nung HungDepartment of Molecular Medicine, University of Texas Health Science Center at San Antonio, San Antonio, Texas.
Chiou-Miin WangDepartment of Molecular Medicine, University of Texas Health Science Center at San Antonio, San Antonio, Texas.
Chun-Lin LinDepartment of Molecular Medicine, University of Texas Health Science Center at San Antonio, San Antonio, Texas.
Nameer B KirmaDepartment of Molecular Medicine, University of Texas Health Science Center at San Antonio, San Antonio, Texas.
Michael A LissDepartment of Urology, University of Texas Health Science Center, San Antonio at San Antonio, Texas.
Addanki P KumarDepartment of Urology, University of Texas Health Science Center, San Antonio at San Antonio, Texas.
LuZhe SunDepartment of Cell Systems and Anatomy, University of Texas Health Science Center at San Antonio, San Antonio, Texas.
Zhijie LiuDepartment of Molecular Medicine, University of Texas Health Science Center at San Antonio, San Antonio, Texas.
Wei-Ting ChaoDepartment of Life Science, Tunghai University, Taichung, Taiwan.
Qianben WangDepartment of Cancer Biology and Genetics, The Ohio State University, Columbus, Ohio.
Victor X JinDepartment of Molecular Medicine, University of Texas Health Science Center at San Antonio, San Antonio, Texas.
Chun-Liang ChenDepartment of Molecular Medicine, University of Texas Health Science Center at San Antonio, San Antonio, Texas. chenc4@uthscsa.edu huangt3@uthscsa.edu.
Tim H-M HuangDepartment of Molecular Medicine, University of Texas Health Science Center at San Antonio, San Antonio, Texas. chenc4@uthscsa.edu huangt3@uthscsa.edu.
Tunghai University · TW

Funding

TISSUE CULTURE---COREP30CA054174 · NCI · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI Lei Zheng · 1991 to 2026
$59.1M
Systems Analysis of Epigenomic Architecture in Cancer ProgressionU54CA217297 · NCI · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI HUANG, TIM H.-M. · 2017 to 2021
$9.3M
Cancer Biology Training ProgramT32CA148724 · NCI · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI Pei Wang, Feng-Chun Yang · 2011 to 2026
$3.3M
Omics analysis of three-dimensional transcriptional regulationR01GM114142 · NIGMS · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI JIN, VICTOR, LIN, SHILI · 2015 to 2024
$2.7M
NCI NIH HHS P30 CA054174NCI NIH HHS T32 CA148724NCI NIH HHS U54 CA217297NIGMS NIH HHS R01 GM114142
6 · The paper itself

Abstract

Increasing evidence suggests the presence of minor cell subpopulations in prostate cancer that are androgen independent and poised for selection as dominant clones after androgen deprivation therapy. In this study, we investigated this phenomenon by stratifying cell subpopulations based on transcriptome profiling of 144 single LNCaP prostate cancer cells treated or untreated with androgen after cell-cycle synchronization. Model-based clustering of 397 differentially expressed genes identified eight potential subpopulations of LNCaP cells, revealing a previously unappreciable level of cellular heterogeneity to androgen stimulation. One subpopulation displayed stem-like features with a slower cell doubling rate, increased sphere formation capability, and resistance to G

Indexed as

AndrogensCell Line, TumorGene Expression ProfilingHumansMaleProstatic NeoplasmsRNAAndrogensRNA

Identifiers

PMID29233929
PMCPMC5983359
OpenAlexW2775443868

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.